Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Malassezia_20furfur_20[genbank_20GCA_5F001265045.1_202015-08-11] 1,694 sequences; 7,877,641 total letters Query= NC_008586.1 Length=131204 Score E Sequences producing significant alignments: (Bits) Value seq1529 104 2e-17 seq785 95.1 1e-14 seq1084 93.3 4e-14 >seq1529 Length=23778 Score = 104 bits (114), Expect = 2e-17 Identities = 141/197 (72%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 ||||| |||| || || ||| | || || || ||| |||| || ||||| || | || Sbjct 210 ATGCAGGTTTTCGTAAAGACTCTGACAGGAAAGACGATCACACTCGAAGTCGAGTCGTCC 151 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 || || | || | |||| ||| || |||||||||||||| ||||| || || ||| Sbjct 150 GACACGATCGAGAACGTCAAGGCAAAGATCCAAGACAAGGAGGGCATTCCCCCGGACCAA 91 Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398 || || ||||| ||||| ||||| ||| | |||||| || ||| | ||| |||||| Sbjct 90 CAGCGCCTTATCTTTGCAGGCAAGCAGCTCGAGGATGGTCGTACCCTGAGCGACTACAAC 31 Query 22399 ATTCAAAAAGAATCCAC 22415 || || || || || || Sbjct 30 ATCCAGAAGGAGTCGAC 14 >seq785 Length=12362 Score = 95.1 bits (104), Expect = 1e-14 Identities = 139/197 (71%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 |||||| | || || || || | || ||||| ||| | || || || || || | | Sbjct 242 ATGCAAGTGTTCGTCAAGACCCTCACGGGTAAGACGATTACCCTCGAGGTCGAGTCGTCG 301 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 || ||| | || || |||| || || || ||||||||||| ||||| || || ||| Sbjct 302 GACACCATCGAGAATGTCAAGGCCAAGATCCAGGACAAGGAGGGCATTCCTCCGGACCAA 361 Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398 || || || || |||||||| || ||| | |||||| |||||| || ||| |||||| Sbjct 362 CAGCGCCTGATCTTTGCCGGTAAGCAGCTCGAGGATGGCCGCACGCTCAGCGACTACAAC 421 Query 22399 ATTCAAAAAGAATCCAC 22415 || || || || || || Sbjct 422 ATCCAGAAGGAGTCGAC 438 >seq1084 Length=2791 Score = 93.3 bits (102), Expect = 4e-14 Identities = 107/144 (74%), Gaps = 0/144 (0%) Strand=Plus/Plus Query 22303 AAAATTCAAGACAAGGAGGGTATTCCACCCGATCAACAACGTCTTATATTTGCCGGCAAA 22362 || || || ||||||||||| ||||| |||||||| || || || || ||||||||||| Sbjct 260 AAGATCCAGGACAAGGAGGGCATTCCGCCCGATCAGCAGCGCCTCATCTTTGCCGGCAAG 319 Query 22363 CAGTTAGAGGATCACCGCACCGTCTCCGATTACAACATTCAAAAAGAATCCACCATACAT 22422 ||| | ||||| ||||| | ||| |||||||| || || || || || | || Sbjct 320 CAGCTCGAGGACGGGCGCACGCTGAGCGACTACAACATCCAGAAGGAGTCTACGCTGCAC 379 Query 22423 TTAGTTTTGCGATTGCGCGGAGGT 22446 | |||||||| ||||||| ||| Sbjct 380 CTCGTTTTGCGCCTGCGCGGCGGT 403 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 419719334453110