Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Malassezia_20furfur_20[genbank_20GCA_5F001265045.1_202015-08-11] 1,694 sequences; 7,877,641 total letters Query= NC_009898.1 Length=368683 Score E Sequences producing significant alignments: (Bits) Value seq1256 123 6e-23 seq1529 113 1e-19 seq785 104 6e-17 seq876 102 2e-16 >seq1256 Length=1729 Score = 123 bits (136), Expect = 6e-23 Identities = 142/191 (74%), Gaps = 0/191 (0%) Strand=Plus/Minus Query 288283 TCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAG 288342 || || ||||| || |||||| ||||||||| |||||||| | || || || || ||| Sbjct 1458 TCCTTCTGGATGTTGTAGTCGCTGAGCGTGCGGCCGTCTTCGAGCTGCTTGCCCGCAAAG 1399 Query 288343 ATCAGACGCTGTTGAGAATCTGGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTT 288402 ||||| |||||||| ||||| || || || ||||||| || | || ||| Sbjct 1398 ATCAGGCGCTGTTGGTCCGGGGGGATGCCCTCCTTGTCCTGGACCTTGGACTTGACGACG 1339 Query 288403 TCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACG 288462 || || | |||||||| || || ||||||||||||||||| || || || ||||||| | Sbjct 1338 TCGATCGTGTCGCTCGACTCGACCTCGAGCGTGATCGTCTTGCCCGTGAGCGTCTTGATG 1279 Query 288463 AATATCTGCAT 288473 || || ||||| Sbjct 1278 AAGATTTGCAT 1268 >seq1529 Length=23778 Score = 113 bits (124), Expect = 1e-19 Identities = 142/194 (73%), Gaps = 6/194 (3%) Strand=Plus/Plus Query 288283 TCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAG 288342 || || ||||| || |||||| || || || || || || | || || ||||| ||| Sbjct 20 TCCTTCTGGATGTTGTAGTCGCTCAGGGTACGACCATCCTCGAGCTGCTTGCCTGCAAAG 79 Query 288343 ATCAGACGCTGTTGAGAATCTGGG---ATTCCTTCTTTATCCTGGATTTTCGCTTTCACG 288399 || || |||||||| || ||| || || || || || ||||| || || || ||| Sbjct 80 ATAAGGCGCTGTTGG---TCCGGGGGAATGCCCTCCTTGTCTTGGATCTTTGCCTTGACG 136 Query 288400 TTTTCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTG 288459 || || || | ||| ||| || |||||||| ||||||||||| || ||||||||||| Sbjct 137 TTCTCGATCGTGTCGGACGACTCGACTTCGAGTGTGATCGTCTTTCCTGTCAGAGTCTTT 196 Query 288460 ACGAATATCTGCAT 288473 ||||| | |||||| Sbjct 197 ACGAAAACCTGCAT 210 >seq785 Length=12362 Score = 104 bits (114), Expect = 6e-17 Identities = 159/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306 ||||| || || | || || || || | ||| || || ||||| || |||||| | Sbjct 468 CCACCACGCAGGCGGAGCACAAGGTGCAGCGTCGACTCCTTCTGGATGTTGTAGTCGCTG 409 Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366 |||||||| || || || | || || || || |||||||| |||||||| || Sbjct 408 AGCGTGCGGCCATCCTCGAGCTGCTTACCGGCAAAGATCAGGCGCTGTTGGTCCGGAGGA 349 Query 288367 ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCTACT 288426 || || || || |||||||| || || || || || || || | || ||| || || Sbjct 348 ATGCCCTCCTTGTCCTGGATCTTGGCCTTGACATTCTCGATGGTGTCCGACGACTCGACC 289 Query 288427 TCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 ||||| || |||||||| || || || ||||||||||| | ||||| Sbjct 288 TCGAGGGTAATCGTCTTACCCGTGAGGGTCTTGACGAACACTTGCAT 242 >seq876 Length=7149 Score = 102 bits (112), Expect = 2e-16 Identities = 305/452 (67%), Gaps = 18/452 (4%) Strand=Plus/Plus Query 325322 ATATATCGTGCACTCGCGTGATCCTTACCACCCTGCAATCTCGAACCGAACTGGCCCTCC 325381 || || || ||||| || ||||| || ||| | | || |||||||||||| | Sbjct 1531 ATGTAACGCGCACTGGCCGCGTCCTTGCCGCCCATGGAGCGCGTACCGAACTGGCCGTTG 1590 Query 325382 GGCAACAACCAGTTGATGTTATTGCTTCCGACATAA-TCCTGTGCAAGGTTCACGATGGT 325440 |||| | | ||||| ||| ||||| ||| || || ||||| |||||| |||||||| Sbjct 1591 GGCATGAGCATGTTGACGTTGTTGCTCCCG-CAGAAGTCCTGCGCAAGGCCGACGATGGT 1649 Query 325441 CCCTTGCAGAGATGCT--TCGCCATGGTGATAGGCGCTATGCTCTGCAACGTAACCGCTG 325498 | ||| | | || ||||| ||||| |||||| | ||||| || ||||| || ||| Sbjct 1650 CATCACCAG-GCT-CTGGTCGCCGTGGTGGTAGGCGGTGTGCTCCGCGACGTAGCC-CTG 1706 Query 325499 -AACTG-TGCAACCTTCACGTCGGTCGTCAAATTGCGCTTGAAAGCTG-AATATATCACT 325555 | ||| ||| ||||| | |||||| | | ||||||||| |||| | | | | ||| Sbjct 1707 CAGCTGCTGC-ACCTTGATTTCGGTCTTGAGGTTGCGCTTG-AAGCAGCCAAACAGCACC 1764 Query 325556 TTCCGTTGAGAAGGTTTGAAACCATCAACGACCGACGGAATGCTTCGTTCCAGATCGTAC 325615 || || || || || || || || || |||||||| ||| || ||| | Sbjct 1765 TTGCGCTGCCCGGGCTTCAAGCCGTCGACCACCGACGGGATGGAGCGGATGTTGTCGGCC 1824 Query 325616 CGCGAGAACAAAATAAGTTCCTTGTCGATGAAGTCGGGAACGGGAACCTCGGGCTTCTTG 325675 |||||| | || || ||||||| ||| ||||||| | ||| | || | | | | Sbjct 1825 ATCGAGAAGAGGATCAGCTCCTTGTTGATAAAGTCGGCGATGGGGATCTGGCGGATGCGG 1884 Query 325676 TGGTCAAGTTGATTTCCTGGTTCGTA-TGCCGTCATCCACTCCTTGCGATCCTCGGC--T 325732 ||||| || | | || || | | || || || |||||||||||| || ||||| | Sbjct 1885 TGGTCGAGGTAGGTGCCGGGCACAAACTGGCG-CAGCCACTCCTTGCGGTCGTCGGCCTT 1943 Query 325733 CGTGACTTGTTGAAAGAACGGTCAATGAGCTC 325764 | | ||||||||| | |||| | ||||| Sbjct 1944 CTT--CTTGTTGAACGCGAGGTCCACAAGCTC 1973 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1179628796338532