Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Malassezia_20furfur_20[genbank_20GCA_5F001265045.1_202015-08-11] 1,694 sequences; 7,877,641 total letters Query= NC_009899.1 Length=344691 Score E Sequences producing significant alignments: (Bits) Value seq897 138 2e-27 seq876 107 4e-18 seq1091 87.8 4e-12 >seq897 Length=43580 Score = 138 bits (152), Expect = 2e-27 Identities = 375/572 (66%), Gaps = 9/572 (2%) Strand=Plus/Minus Query 333783 TGGATAATAGAGGTGCAAACAGCGTCGAGGAACCCGGAGTCGTGTGACACAATCACGCAC 333842 |||| ||| ||| || || ||| ||||||| ||||||||| || ||||| | || Sbjct 27107 TGGAGAATGTCGGTACACACGTCGTTGAGGAACTTGGAGTCGTGCGAGACAATGATCGAC 27048 Query 333843 GAAACGTCCTTAAGGTTGATCAGGTATTCAATCAGCCACCTCACGTTAGACACAGAAAGA 333902 | || | || || | ||||| || | | |||| | ||||| |||| | Sbjct 27047 GTGGTCTCGGTGAGACTGTTGAGGTAGTCCGTGATCCACTTGACGTTGATCACATCCAAG 26988 Query 333903 TGGTTGGTCGGCTCGTCAAGAAGTAGTAGCTTTGCGTTCAGGAGCATTGCACGTGCAAGA 333962 ||||| |||||||||||||| || || | | || || | |||| ||||| || || Sbjct 26987 TGGTTCGTCGGCTCGTCAAGCAGAAGAATGTCGGCCTTGAACAGCACCGCACGCGCCAGG 26928 Query 333963 GCGAGTTTCATTTTCCACCCTCCTGAAAGAGTGTTAATTGGGGCAGATTGGCGCTCAATA 334022 ||||| ||||| ||||| || || || || | |||| || ||| ||||||| | Sbjct 26927 GCGAGCTTCATCTTCCAGCCACCCGAGAGCGCCGTAATGGGACCAGCCTGGCGCTGCTCA 26868 Query 334023 TCAAAGCCAACCGATTCTAGAGTAGTTACGATCTTTTCACGAGACCAAATGTTTTCCTTT 334082 || ||||| | | | || ||| || |||| | | | || | || Sbjct 26867 TCGAAGCCCATC--TCCTTGAG------CG-TCTTGGCCGCCGTCTCGTGGTCGACGTTC 26817 Query 334083 ACTTGTTCATCATTGGCAATGAAGTCAATGATAGCCATGTTAGAATCGGACCCGTCGAGA 334142 | | | || | | |||||||| || || | |||| | || || |||||||| Sbjct 26816 AGGCGCTTGTCGGCGACGATGAAGTCGATAATGGAAATGTCACCCTCCGAGCCGTCGAGG 26757 Query 334143 TCGTGTTCCACGTAAGCAGTTTTCAAAACATCCGCAGAGGGGAACCCTTCAAGCTGACCG 334202 ||||| || ||||| || || | || | |||||||| || |||| ||||||| Sbjct 26756 TCGTGCTCGACGTACCAGGTGCGCACCTCGTCGGGCGAGGGGAAGCCCTCAACCTGACCG 26697 Query 334203 TTCACAATAGCGCGCATCAGAGTTGATTTACCCGCCCCGTTTGGCCCACACAGACCGTAG 334262 ||| || ||||||||||| || || ||||||| ||||| | ||||||||||||||| Sbjct 26696 TTCTGGATGGCGCGCATCAGCGTCGACTTACCCGAACCGTTGCGGCCACACAGACCGTAG 26637 Query 334263 CGGTTTCCACGCTTCAGATTGAACCGCGTATTGTTCAGAAGAATTTTTCCACCATATGCC 334322 |||| |||||||| || | | || |||| || ||||| || |||| || || Sbjct 26636 CGGTGGCCACGCTTGAGGCGCAGCGTCGCCGTGTTGAGCAGAATCTTGGCACCGTAGGCG 26577 Query 334323 AGAGAAAATTCACAATCACACAGATCCTCACC 334354 || || || | || | ||||| || |||| Sbjct 26576 AGCGAGAACTGGCAGTTGCACAGGTCGACACC 26545 >seq876 Length=7149 Score = 107 bits (118), Expect = 4e-18 Identities = 310/458 (68%), Gaps = 18/458 (4%) Strand=Plus/Plus Query 297437 GTGAAAATATATCGTGCACTCGCGTGATCCTTACCACCCTGCAATCTCGAACCGAACTGG 297496 ||||| || || || ||||| || ||||| || ||| | | || |||||||||| Sbjct 1525 GTGAAGATGTAACGCGCACTGGCCGCGTCCTTGCCGCCCATGGAGCGCGTACCGAACTGG 1584 Query 297497 CCCTCCGGCAACAACCAGTTGATGTTATTGCTTCCGACATAA-TCCTGTGCAAGGTTCAC 297555 || | |||| | | ||||| ||| ||||| ||| || || ||||| |||||| || Sbjct 1585 CCGTTGGGCATGAGCATGTTGACGTTGTTGCTCCCG-CAGAAGTCCTGCGCAAGGCCGAC 1643 Query 297556 GATGGTCCCTTGCAGAGATGCT--TCGCCATGGTGATAGGCGCTATGCTCTGCAACGTAA 297613 ||||||| ||| | | || ||||| ||||| |||||| | ||||| || ||||| Sbjct 1644 GATGGTCATCACCAG-GCT-CTGGTCGCCGTGGTGGTAGGCGGTGTGCTCCGCGACGTAG 1701 Query 297614 CCGCTG-AACTG-TGCAACCTTCACGTCGGTCGTCAAATTGCGCTTGAAAGCTG-AATAT 297670 || ||| | ||| ||| ||||| | |||||| | | ||||||||| |||| | | | Sbjct 1702 CC-CTGCAGCTGCTGC-ACCTTGATTTCGGTCTTGAGGTTGCGCTTG-AAGCAGCCAAAC 1758 Query 297671 ATCACTTTCCGTTGAGAAGGTTTGAAACCATCAACGACCGACGGAATGCTTCGTTCCAGA 297730 | ||| || || || || || || || || || |||||||| ||| || Sbjct 1759 AGCACCTTGCGCTGCCCGGGCTTCAAGCCGTCGACCACCGACGGGATGGAGCGGATGTTG 1818 Query 297731 TCGTACCGCGAGAACAAAATAAGTTCCTTGTCGATGAAGTCGGGAACGGGAACCTCGGGC 297790 ||| | |||||| | || || ||||||| ||| ||||||| | ||| | || | | Sbjct 1819 TCGGCCATCGAGAAGAGGATCAGCTCCTTGTTGATAAAGTCGGCGATGGGGATCTGGCGG 1878 Query 297791 TTCTTGTGGTCAAGTTGATTTCCTGGTTCGTA-TGCCGTCATCCACTCCTTGCGATCCTC 297849 | |||||| || | | || || | | || || || |||||||||||| || || Sbjct 1879 ATGCGGTGGTCGAGGTAGGTGCCGGGCACAAACTGGCG-CAGCCACTCCTTGCGGTCGTC 1937 Query 297850 GGC--TCGTGACTTGTTGAAAGAACGGTCAATGAGCTC 297885 ||| || | ||||||||| | |||| | ||||| Sbjct 1938 GGCCTTCTT--CTTGTTGAACGCGAGGTCCACAAGCTC 1973 >seq1091 Length=2794 Score = 87.8 bits (96), Expect = 4e-12 Identities = 160/232 (69%), Gaps = 2/232 (1%) Strand=Plus/Plus Query 243486 CGAAACGGTCAAACAAATCATCACAGAAGCAGTTGAAAACGAAAAGGAATTCATTTGCGA 243545 ||| ||||| || | ||||| || || || || | | || |||| ||| ||| || Sbjct 2341 CGACACGGTGAACCGCATCATTACCGAGGCGGTGGCGATTGAGCAGGATTTCCTTTCGGA 2400 Query 243546 CGCTATTCCA-TGCCGGCTTATTGGCATGAACTCTGAACTCATGGGACAGTACATCGAAT 243604 || | || || || || ||||||||||| | || ||| | |||||||| || | Sbjct 2401 TGCGCTGCCCGTGTCG-CTGATTGGCATGAATGCGCGCCTGATGTGCCAGTACATTGAGT 2459 Query 243605 TCGTAGCCGACCGCATTTTCATCGCGCTTGGTTATGAGAAAGTGTACAACTCCAAGAACC 243664 | || || |||||| | || | ||||| || | ||| |||||| | | ||||| Sbjct 2460 TTGTGGCGGACCGCCTGCTCGTGGCGCTGGGCAACCCGAAGCACTACAACGCGACGAACC 2519 Query 243665 CCTTTGCCTTTATGGAGCTCATTTCGCTTCAAGGGAAAACTAACTTCTTCGA 243716 |||| | |||||||||| ||||||||| || || || | ||||| ||||| Sbjct 2520 CCTTCGACTTTATGGAGAACATTTCGCTGCAGGGCAAGTCGAACTTTTTCGA 2571 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1102856062678900