Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Malassezia_20furfur_20[genbank_20GCA_5F001265045.1_202015-08-11] 1,694 sequences; 7,877,641 total letters Query= NC_011616.1 Length=148634 Score E Sequences producing significant alignments: (Bits) Value seq1091 147 2e-30 seq1529 118 1e-21 seq785 116 4e-21 seq946 111 1e-19 seq1084 98.7 9e-16 seq1256 87.8 2e-12 >seq1091 Length=2794 Score = 147 bits (162), Expect = 2e-30 Identities = 301/441 (68%), Gaps = 21/441 (5%) Strand=Plus/Plus Query 47148 GCTTTCGCCATCGTCGAGGGCGTCTTCTTCTCGGGCAGCTTTGCGGCGATATTTTACATG 47207 || || ||| |||||||||| ||||||||||||| || ||| |||| || | | Sbjct 2162 GCGTTTGCCGCCGTCGAGGGCATCTTCTTCTCGGGGTCGTTCGCGTCGATCTTCTGGCTC 2221 Query 47208 AAAACCAAAGGAGTTATGCCCGGCCTCACGTTTAGCAACGAGCTAATCTCGAGAGACGAA 47267 || | || | ||||||||||| |||| |||||||| |||||| | ||||| Sbjct 2222 AAGAAGCGCGGTCTGATGCCCGGCCTGTCGTTCTCGAACGAGCTCATCTCGCGTGACGAG 2281 Query 47268 GGCCTGCACACCAACTTTGCCTGTCT-CTACTACAACACTAGAGTCGATCAAAAGT-TGG 47325 || ||||||||| |||||||||| || || | ||| || | ||| || Sbjct 2282 GGTCTGCACACCGACTTTGCCTGCCTGCTGTTTGGCCACCTGA-------AGAAGCGTGC 2334 Query 47326 ACGTGCC--CACCGTCAGCGACATGTTTGCCGAAGCCGTCGCCATTGAGATGGAGTT--T 47381 | || ||| || | | ||| || |||| || || || |||||| ||| || | Sbjct 2335 GCACCCCGACACGGTGAACCGCATCATTACCGAGGCGGTGGCGATTGAGCAGGATTTCCT 2394 Query 47382 TTCGCCGAGGCTCTGCCCGAATCTTTAGTGGGAATGAACGCGGAGATGATGAGAAAGTAC 47441 |||| || || ||||||| || | | || ||||| ||| ||||| | ||||| Sbjct 2395 TTCG--GATGCGCTGCCCGTGTCGCTGATTGGCATGAATGCGCGCCTGATGTGCCAGTAC 2452 Query 47442 ATCGAATTTGTCGCCGACCGCCTGCTCGTTCAGCTAAAGTATCCCAAGATTTACCACACC 47501 || || ||||| || |||||||||||||| ||| | || ||| ||| || | Sbjct 2453 ATTGAGTTTGTGGCGGACCGCCTGCTCGTGGCGCTGGGCAACCCGAAGCACTACAACGCG 2512 Query 47502 GAGAATCCATTCGAGTTTATGAACAACATTTCGCTCGAGGGCAAGACCAACTTTTTCGAG 47561 ||| || ||||| |||||| | ||||||||||| |||||||| | |||||||||||| Sbjct 2513 ACGAACCCCTTCGACTTTATGGAGAACATTTCGCTGCAGGGCAAGTCGAACTTTTTCGAG 2572 Query 47562 ---AAGCGCGTCGGCGAATAT 47579 ||| |||||||| ||| Sbjct 2573 CGCAAG---GTCGGCGACTAT 2590 >seq1529 Length=23778 Score = 118 bits (130), Expect = 1e-21 Identities = 152/210 (72%), Gaps = 0/210 (0%) Strand=Plus/Plus Query 126905 ACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCCCATCGTGCGAGAATCGTCT 126964 ||||| || | ||| ||||| || || || ||||| |||| || || ||| ||| || Sbjct 2 ACCAAGTGAAGCGTCGACTCCTTCTGGATGTTGTAGTCGCTCAGGGTACGACCATCCTCG 61 Query 126965 AGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGTATGCCCTCCTTGTCCGTG 127024 ||||| || || || |||| | ||||| || || || || |||||||||||||| | Sbjct 62 AGCTGCTTGCCTGCAAAGATAAGGCGCTGTTGGTCCGGGGGAATGCCCTCCTTGTCTTGG 121 Query 127025 ATTTTCTGCTTGAGTTGTTCGACGGTGTCCGTACTCTCGACTTCGACGGTCACCGTTTTG 127084 || || ||||| | |||| ||||| | ||||||||||| || | ||| || Sbjct 122 ATCTTTGCCTTGACGTTCTCGATCGTGTCGGACGACTCGACTTCGAGTGTGATCGTCTTT 181 Query 127085 CCGGTCAGAGTTTTTACAAAAATCTGCATG 127114 || |||||||| ||||| |||| ||||||| Sbjct 182 CCTGTCAGAGTCTTTACGAAAACCTGCATG 211 >seq785 Length=12362 Score = 116 bits (128), Expect = 4e-21 Identities = 165/232 (71%), Gaps = 0/232 (0%) Strand=Plus/Minus Query 126884 GCTCCACCGCGTAATCGCAACACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCG 126943 || ||||| || | || | ||| | || | ||| ||||| || || || ||||| ||| Sbjct 471 GCACCACCACGCAGGCGGAGCACAAGGTGCAGCGTCGACTCCTTCTGGATGTTGTAGTCG 412 Query 126944 CCCATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGA 127003 | | |||||| ||| || ||||| || || || |||||| ||||| || || ||| Sbjct 411 CTGAGCGTGCGGCCATCCTCGAGCTGCTTACCGGCAAAGATCAGGCGCTGTTGGTCCGGA 352 Query 127004 GGTATGCCCTCCTTGTCCGTGATTTTCTGCTTGAGTTGTTCGACGGTGTCCGTACTCTCG 127063 || ||||||||||||||| ||| || ||||| | |||| |||||||| |||| Sbjct 351 GGAATGCCCTCCTTGTCCTGGATCTTGGCCTTGACATTCTCGATGGTGTCCGACGACTCG 292 Query 127064 ACTTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCATGG 127115 || |||| ||| | ||| || || || || || || || || | ||||||| Sbjct 291 ACCTCGAGGGTAATCGTCTTACCCGTGAGGGTCTTGACGAACACTTGCATGG 240 >seq946 Length=5161 Score = 111 bits (122), Expect = 1e-19 Identities = 151/209 (72%), Gaps = 4/209 (2%) Strand=Plus/Minus Query 147273 GTAGATGCCGTCGATGCTGTCTTCCTTGATGCATTGCAGGAAACACGAACACATTTGGGG 147332 ||||||||| ||||| ||| ||||| ||||| |||||| ||||| |||| ||||| Sbjct 1100 GTAGATGCCCTCGATCGAGTCGTCCTTCATGCACACCAGGAAGCACGACGACATCTGGGG 1041 Query 147333 ACGACACGTGCCCGCCGCAAACAGCGTGGGGCTGGCGTGCGTGAACG--TGCCCAGACTC 147390 | ||||||||| || ||||| || ||||||||| || | | | | ||| Sbjct 1040 GCTTGGCGTGCCCGCGTTGAAAAGCGTCGGCGAGGCGTGCGTAAAGGCCTTCTCCGAC-- 983 Query 147391 ATCAATTGATACGTTTCAATGGCGCTCATAACGTCATCGCCGTGAATGGCCAGGGCGACG 147450 |||| | ||||| || || |||||| ||||| |||||| ||| ||| || || Sbjct 982 ATCATGTTGTACGTCTCGATAGCGCTCTCGACGTCGGTGCCGTGGATGCCCACCGCCACA 923 Query 147451 CGCATGAGCATGTGCTGGGGTCGTTCCGC 147479 |||||||||||||||||||| || || || Sbjct 922 CGCATGAGCATGTGCTGGGGGCGCTCGGC 894 >seq1084 Length=2791 Score = 98.7 bits (108), Expect = 9e-16 Identities = 110/147 (75%), Gaps = 0/147 (0%) Strand=Plus/Minus Query 126883 TGCTCCACCGCGTAATCGCAACACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATC 126942 ||| || ||||| | ||||| || | || | ||||||||| || || || ||||| || Sbjct 406 TGCACCGCCGCGCAGGCGCAAAACGAGGTGCAGCGTAGACTCCTTCTGGATGTTGTAGTC 347 Query 126943 GCCCATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGG 127002 || || |||||| || || ||||| || || || |||| | |||||||||||||| Sbjct 346 GCTCAGCGTGCGCCCGTCCTCGAGCTGCTTGCCGGCAAAGATGAGGCGCTGCTGATCGGG 287 Query 127003 AGGTATGCCCTCCTTGTCCGTGATTTT 127029 || ||||||||||||||| ||| || Sbjct 286 CGGAATGCCCTCCTTGTCCTGGATCTT 260 >seq1256 Length=1729 Score = 87.8 bits (96), Expect = 2e-12 Identities = 140/201 (70%), Gaps = 0/201 (0%) Strand=Plus/Minus Query 126916 CGTAGACTCTTTTTGAATATTGTAATCGCCCATCGTGCGAGAATCGTCTAGCTGTTTTCC 126975 ||| ||||| || || || ||||| |||| | |||||| || || ||||| || || Sbjct 1465 CGTCGACTCCTTCTGGATGTTGTAGTCGCTGAGCGTGCGGCCGTCTTCGAGCTGCTTGCC 1406 Query 126976 AGCGTAGATCAATCGCTGCTGATCGGGAGGTATGCCCTCCTTGTCCGTGATTTTCTGCTT 127035 || |||||| ||||| || || || || ||||||||||||||| || || ||| Sbjct 1405 CGCAAAGATCAGGCGCTGTTGGTCCGGGGGGATGCCCTCCTTGTCCTGGACCTTGGACTT 1346 Query 127036 GAGTTGTTCGACGGTGTCCGTACTCTCGACTTCGACGGTCACCGTTTTGCCGGTCAGAGT 127095 || |||| ||||| | |||||| |||| || | ||| ||||| || || || Sbjct 1345 GACGACGTCGATCGTGTCGCTCGACTCGACCTCGAGCGTGATCGTCTTGCCCGTGAGCGT 1286 Query 127096 TTTTACAAAAATCTGCATGGC 127116 || | || || |||||||| Sbjct 1285 CTTGATGAAGATTTGCATGGC 1265 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 475490731270560