Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Malassezia_20furfur_20[genbank_20GCA_5F001265045.1_202015-08-11] 1,694 sequences; 7,877,641 total letters Query= NC_012639.1 Length=141291 Score E Sequences producing significant alignments: (Bits) Value seq946 114 1e-20 seq1529 113 4e-20 >seq946 Length=5161 Score = 114 bits (126), Expect = 1e-20 Identities = 430/665 (65%), Gaps = 31/665 (5%) Strand=Plus/Plus Query 122898 AAGGTCGCCGAACGTATTCAACATATGCTCATGCGCGTCGCTATAGGCGTGCACGGACGC 122957 ||||||||||| || || || ||||||||||| || || | ||| | ||||| | Sbjct 888 AAGGTCGCCGAGCGCCCCCAGCACATGCTCATGCGTGTGGCGGTGGGCATCCACGGCACC 947 Query 122958 GACATCGAAAACGCGACCGAAACTTACGATTTGATGTCTCAAAAATTTTTCACGCACGCG 123017 ||| |||| | ||| | ||| || ||| | ||||||| | || || |||||||| Sbjct 948 GACGTCGAGAGCGCTATCGAGACGTACAACATGATGTCGGAGAAGGCCTTTACGCACGCC 1007 Query 123018 AGTCCCACTTTGTTCGCCGCCGGCACG--AAGTTGCCTCAGTTGTCTTCGTGTTTTTTGC 123075 || || | ||| ||| |||||| ||| || ||| |||| ||||| || || Sbjct 1008 TCGCCGACGCTTTTCAACGCGGGCACGCCAAGC--CCCCAGATGTCGTCGTGCTTCCTGG 1065 Query 123076 TCACCTTGCGCGAAGACAGCATCACCGGTATCTATGAAACTTTGCGCGATT---GCGCGT 123132 | | || || ||| ||| || ||||| || || || | | | | ||| Sbjct 1066 TGTGCATGAAGGACGACTCGATCGAGGGCATCTACGACAC---GCTCAAGTCGTGTGCGA 1122 Query 123133 TGATTTCCAAATTTGGCGGCGGCATAGGCGTGAACGTGCACGACGTAAGAGGCCGCGGAA 123192 |||| ||||| | |||||||| || | ||| | ||| | | |||||| | Sbjct 1123 TGATCTCCAAGACGGCGGGCGGCATTGGTCTCAACATTCACTGCAT------CCGCGGTA 1176 Query 123193 ---GC-CG--CATCAGAAGCACCGACGGAATCGCCTCCGGGCTCGAATCCATGCTGCGAG 123246 || || ||| |||| |||| | | ||| | | ||||||| || | Sbjct 1177 CGGGCTCGTACATTGCCGGCACGAACGGTGTGAGCAACGGCATTGTGCCCATGCTCCGCG 1236 Query 123247 TTTACAATAACGCCGTGCGGCACGTCGACCAGGGCGGCAAA---CGCAAAGGCGCGATGG 123303 | ||||| ||| | | ||| ||||||||||||| ||||| ||| || ||| | | Sbjct 1237 TGTACAACAACACGGCGCGCTACGTCGACCAGGGTGGCAACAAGCGCCCTGGTGCGTTTG 1296 Query 123304 CGATCTATCTAGAACCGTGGCACGTTGATGTGTACGATTTTTTAAATTTAAAACGCAACA 123363 | ||||| || || ||||||||| || |||| || ||| | | | ||||| | Sbjct 1297 CCATCTACCTCGAGCCGTGGCACTCGGACGTGTTTGAGTTTATCGACCTG---CGCAAGA 1353 Query 123364 TGGG-GGC--GGAAGAAAAGAAAGCCCGCGATTTGTTGTACGCTTTATGGGTACCCGATT 123420 ||| |||||| | || ||||| |||| ||||| | ||||| ||||| Sbjct 1354 ACCACGGCAAGGAAGAGGTGCGCGCGCGCGACCTGTTTTACGCGCTGTGGGTGCCCGACC 1413 Query 123421 TGTTTATGCGACGCGTAAAAGACGACGGCGTGTGGTCGCTCATGTGTCCCGATCGGTGTC 123480 |||||||||| || || | | | ||||| ||| |||| ||||| |||| | | Sbjct 1414 TGTTTATGCGCCGTGTCGAGCAGGGCGGCGACTGGACGCTGATGTGCCCCGCCGAGGCGC 1473 Query 123481 CCGGCTTGAGCGACGTTTACGGCAATCAGTTTGACGAGTTGTACGCGCAATACGAGCGCG 123540 ||||| || |||| || ||| | ||||||||| | |||||| || |||||||||| Sbjct 1474 CCGGCCTGGCCGACTGCTATGGCGAAGAGTTTGACGCGCTGTACGAGCGCTACGAGCGCG 1533 Query 123541 AAGGC 123545 | ||| Sbjct 1534 AGGGC 1538 >seq1529 Length=23778 Score = 113 bits (124), Expect = 4e-20 Identities = 149/204 (73%), Gaps = 2/204 (1%) Strand=Plus/Plus Query 45138 TGCAGCGTTGATTCCTTTTGGATATTATAATCGCTGACGGTTTTAGAATCGTCCAATTGT 45197 || ||||| || ||||| ||||| || || ||||| | ||| | ||| || | || Sbjct 8 TGAAGCGTCGACTCCTTCTGGATGTTGTAGTCGCTCAGGGTACGACCATCCTCGAGCTGC 67 Query 45198 TTTCCTGCGTATATCAATCGTTGCTGGTCCGGCGGAATGCCTTCTTTATCTTGAATTTTT 45257 || ||||| | || | || || |||||||| |||||||| || || ||||| || ||| Sbjct 68 TTGCCTGCAAAGATAAGGCGCTGTTGGTCCGGGGGAATGCCCTCCTTGTCTTGGATCTTT 127 Query 45258 TGTTTGATCGCT-TCTACGGTGTCGGAAGACTCGACTTCGAGAGTAACCGTTTTGCCGGT 45316 |||| || | || | |||||||| |||||||||||||| || | ||| || || || Sbjct 128 GCCTTGA-CGTTCTCGATCGTGTCGGACGACTCGACTTCGAGTGTGATCGTCTTTCCTGT 186 Query 45317 TAGAGTTTTTACAAAAATTTGCAT 45340 ||||| ||||| |||| ||||| Sbjct 187 CAGAGTCTTTACGAAAACCTGCAT 210 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 451993628832240