Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Malassezia_20furfur_20[genbank_20GCA_5F001265045.1_202015-08-11] 1,694 sequences; 7,877,641 total letters Query= NC_013668.3 Length=248526 Score E Sequences producing significant alignments: (Bits) Value seq946 187 4e-42 seq1091 183 5e-41 >seq946 Length=5161 Score = 187 bits (206), Expect = 4e-42 Identities = 522/784 (67%), Gaps = 28/784 (4%) Strand=Plus/Minus Query 203833 CTTCGTCTTGTCCACCGTGAACTGAATGGCGTTCACGGCAGGCCTGCTTCTCAGATAGTA 203892 |||||| || |||||||||||| ||||| | | |||| || | | | ||| ||||| Sbjct 2679 CTTCGT--TGCTCACCGTGAACTGGATGGCCTGCGCGGCGGGGCGCGTGCGCAGGTAGTA 2622 Query 203893 CATGCCGGTCTTTAGGCCCTTCTGCCACCCGTACATGTGCATGGAAGACAGTTTGCTCA- 203951 |||| ||||| || ||||||| ||| ||||| | |||||| || | || | || || Sbjct 2621 GGTGCCCGTCTTGAGCCCCTTCTTCCAGCCGTAAAAGTGCATCGAGGTGAGCT-GCCCAA 2563 Query 203952 -CGTTGGGGTCGGCCATGTGAATGTTCAGAGACTGGCTTTGGTCGATGAAAGGCGCC-CG 204009 ||| || | || | || ||||| || |||||| ||| |||||| | |||| || Sbjct 2562 ACGTCGGCG-CGCTGAGATGGATGTTGAGGCTCTGGCTCTGGCAGATGAATG-CGCCGCG 2505 Query 204010 ATCTGCGGCCATATTGATAATGGTCTTCTGCGAAATCTCCCACACCGTCTTGAACA-CGT 204068 || || ||||| | ||||||| ||| |||||||||||||| || |||||| | | || Sbjct 2504 GTCGGCCGCCATGTCGATAATGACCTTTTGCGAAATCTCCCAGACGGTCTTGTAGAGCGC 2445 Query 204069 CTCTGGTGTGTTGAGGCACATCTTCCC---ACGTCCTG-ATCGAGCCGTTGTCGGCCATC 204124 || || || | | || | | ||| |||| ||| ||||||||| || || || Sbjct 2444 CT-TGATGCGGTCCGGGA----TGCCCGGCACGTTCTGGATCGAGCCGCCGTGCGCAATG 2390 Query 204125 AGTCTCATCCTCGTCTCCTCCCCCCACATGCCCAACCTGATCAGCTCCCGCACCAGGTGG 204184 | | | | || ||| ||| ||||| |||| | || |||||| |||| || Sbjct 2389 ATGCGCTGCTTCATCTGCTCGTTCCACAGGCCCTGCTCGACCAGCTCGCGCAGGAGCCAC 2330 Query 204185 GGGTTGATGATCTGAAAGTCTCCGGACAGCACCCCTCGGGTGAACAGGTTGTTGGTGAAT 204244 ||||| | | ||| || || || | ||||| | || || | | |||| | ||| | Sbjct 2329 GGGTTCACCACCTGGAACTCGCCCGCGAGCACGCGGCGCATGTAAATGTTGCTCGTGTAC 2270 Query 204245 GGTTCGAACGCCTCGTTGTTGCCGAAAATCTGAGCGGTGCTGGCCGTGGGCATGGGAGCC 204304 || || || ||||||| ||||| ||||| ||| ||||||||||| || ||| Sbjct 2269 GGCTCAAAGCACTCGTTGAAGCCGAGGATCTGGCTCGTGGACGCCGTGGGCATCGGCGCC 2210 Query 204305 AGGAGCAGGGAGTTGCGCACACCGTATTTTTGGACCCTGCGCTTCAGAGAGGTCCAGTCG 204364 |||||||| |||||||||| |||| | | | || ||| || |||| |||||| Sbjct 2209 AGGAGCAGCGAGTTGCGCAGGCCGTGCTCGGCAATCTTGGCCTTGAGCGAGGCCCAGTCC 2150 Query 204365 TGCATCGCACTGGGTTTCACGCCCCACATGTCGAACTGAAAGATGCCTTGACTGACTGGG 204424 | | |||| || | ||| | |||| |||| | | ||| || | ||| Sbjct 2149 CAGAGGTCGGTGGGCGTCTTGTTCCAGAGGTCGTACTGCAGTAGGCCCTGCGACGCAGGG 2090 Query 204425 CTGCCCTTGTACGTCGGATAAGGCTGATCCTCTTCTGCCAGCTTGCACGAGGCGGCCATG 204484 || |||| ||||||| || ||| || | ||||||| ||| || ||| || | Sbjct 2089 CTCCCCTCGTACGTCTCGTACGGCCCCTCGATGGCGGCCAGCTCGCAGGA-GCGCTCAAG 2031 Query 204485 ----GCGTGATAGTACATGGTCTCAAAGATCTGAACGTTTAATCTGGCG-GCCTCCGTTC 204539 ||||| ||| || |||||||||||||| | ||| | | |||| ||||| | | Sbjct 2030 CGCCGCGTG---GTAGATCGTCTCAAAGATCTGCAGGTTGAGGC-GGCGCGCCTCGGCGC 1975 Query 204540 CGTCAAACGCCAGACCCAGCATGGCAAACACGTCCGCCAAGCCCTGCACTCCGATTCCCA 204599 ||| |||| |||| || ||| | ||||||| |||||| || || || || | Sbjct 1974 TGTCGAACGGATAGCCCATGATCATGAACGCATCCGCCAGGCCCTGGACACCAATGCCGA 1915 Query 204600 ACGG 204603 ||| Sbjct 1914 TCGG 1911 >seq1091 Length=2794 Score = 183 bits (202), Expect = 5e-41 Identities = 307/433 (71%), Gaps = 17/433 (4%) Strand=Plus/Minus Query 159652 CTCGAAAAAGTTGGTCTTGCCCTCCATGGATATTGATTCCATGAACCCGAATGGGTTCTT 159711 |||||||||||| | |||||||| || || || ||||| || |||| |||||| | Sbjct 2572 CTCGAAAAAGTTCGACTTGCCCTGCAGCGAAATGTTCTCCATAAAGTCGAAGGGGTTCGT 2513 Query 159712 CACGTGATAGCGCTTCGGAAATCCGAGAGCCGCCAGCAACCTGTCTGCCACAAATTCGAT 159771 | ||| ||| ||||||| || || ||| | |||| | ||| |||||||| || || Sbjct 2512 CGCGTTGTAGTGCTTCGGGTTGCCCAGCGCCACGAGCAGGCGGTCCGCCACAAACTCAAT 2453 Query 159772 GTAGCTACACATCTG-CTCACAGTTGATCCCCAGCAGCCTAACGGGGAGCGCTTCCGACA 159830 ||| |||||| | | | || || || || | |||| ||||| ||||| ||||| | Sbjct 2452 GTACTGGCACATCAGGCGCGCA-TTCATGCCAATCAGCGACACGGGCAGCGCATCCGAAA 2394 Query 159831 GAAACTCCTTCTCAATCTCGACCGCTTCGGTCACAATCTGCGAGACAC-GT-TCG---TA 159885 | || |||| ||||||| | ||||| ||||| | || ||| ||| || ||| | Sbjct 2393 GGAAATCCTGCTCAATCGCCACCGCCTCGGTAATGAT--GCGGTTCACCGTGTCGGGGTG 2336 Query 159886 CCCCGGCTTGCCCAAAATGTGGTCCTTAAACAGGAGGCACGCAAAGTCGCAGTGCAGTCC 159945 | | |||| || |||| | |||||| ||||| ||||||||| |||||| || Sbjct 2335 CGCACGCTTCTTCAG---GTGGCC---AAACAGCAGGCAGGCAAAGTCGGTGTGCAGACC 2282 Query 159946 CTCGTCCCGAGAGATGAACTCGTTGGACATGATGAGGCCCGGCATGATCCCACGCGGTTT 160005 |||||| || ||||||| |||||| || | ||||| ||||| | || ||| || Sbjct 2281 CTCGTCACGCGAGATGAGCTCGTTCGAGAACGACAGGCCGGGCATCAGACCGCGCTTCTT 2222 Query 160006 GAGCCAAAAAATGGCCGCAAAAGCACCGCTAAAA-AAGATCCCCTCCACGGCCGCAAACG 160064 |||||| || || | ||| || | ||| | | || ||||| ||||| ||||| ||||||| Sbjct 2221 GAGCCAGAAGATCGACGCGAACG-ACCCCGAGAAGAAGATGCCCTCGACGGCGGCAAACG 2163 Query 160065 CCACGAGCCTCTC 160077 |||| || | ||| Sbjct 2162 CCACAAGGCGCTC 2150 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 795138362588640