Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Malassezia_20furfur_20[genbank_20GCA_5F001265045.1_202015-08-11] 1,694 sequences; 7,877,641 total letters Query= NC_015326.1 Length=346754 Score E Sequences producing significant alignments: (Bits) Value seq1529 176 1e-38 seq785 165 2e-35 seq1256 100 6e-16 seq1084 89.7 1e-12 >seq1529 Length=23778 Score = 176 bits (194), Expect = 1e-38 Identities = 166/212 (78%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 194937 GTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCGAGCTG 194996 |||||| || ||||| || || || ||||| ||| || || | ||||| |||||||| Sbjct 7 GTGAAGCGTCGACTCCTTCTGGATGTTGTAGTCGCTCAGGGTACGACCATCCTCGAGCTG 66 Query 194997 CTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGAATTTT 195056 ||| ||||| |||||||| || |||||||| || |||||||| || |||||||| || || Sbjct 67 CTTGCCTGCAAAGATAAGGCGCTGTTGGTCCGGGGGAATGCCCTCCTTGTCTTGGATCTT 126 Query 195057 TTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTTCCTGT 195116 | |||||||||||| || ||||| || || ||||| || || | |||||||||||| Sbjct 127 TGCCTTGACGTTCTCGATCGTGTCGGACGACTCGACTTCGAGTGTGATCGTCTTTCCTGT 186 Query 195117 CAAAGTTTTTACGAACACTTGCATTTATGGTT 195148 || ||| |||||||| || ||||| | || || Sbjct 187 CAGAGTCTTTACGAAAACCTGCATGTGTGTTT 218 >seq785 Length=12362 Score = 165 bits (182), Expect = 2e-35 Identities = 162/209 (78%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 194932 ACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCG 194991 |||||||| || || ||||| || || || ||||| ||| || || | ||||| ||| Sbjct 450 ACAAGGTGCAGCGTCGACTCCTTCTGGATGTTGTAGTCGCTGAGCGTGCGGCCATCCTCG 391 Query 194992 AGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGA 195051 ||||||||||| || ||||| || || |||||||| ||||||||||| || ||||| || Sbjct 390 AGCTGCTTACCGGCAAAGATCAGGCGCTGTTGGTCCGGAGGAATGCCCTCCTTGTCCTGG 331 Query 195052 ATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTT 195111 || || |||||| ||||| ||||||||||| || || || ||||||| |||||| Sbjct 330 ATCTTGGCCTTGACATTCTCGATGGTGTCCGACGACTCGACCTCGAGGGTAATCGTCTTA 271 Query 195112 CCTGTCAAAGTTTTTACGAACACTTGCAT 195140 || || | || || |||||||||||||| Sbjct 270 CCCGTGAGGGTCTTGACGAACACTTGCAT 242 >seq1256 Length=1729 Score = 100 bits (110), Expect = 6e-16 Identities = 150/212 (71%), Gaps = 6/212 (3%) Strand=Plus/Minus Query 194932 ACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCG 194991 |||||||| || || ||||| || || || ||||| ||| || || | || |||||| Sbjct 1476 ACAAGGTGGAGCGTCGACTCCTTCTGGATGTTGTAGTCGCTGAGCGTGCGGCCGTCTTCG 1417 Query 194992 AGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGA 195051 |||||||| || || ||||| || || |||||||| || || ||||| || ||||| || Sbjct 1416 AGCTGCTTGCCCGCAAAGATCAGGCGCTGTTGGTCCGGGGGGATGCCCTCCTTGTCCTGG 1357 Query 195052 ATTTTTTGCTTGACGTTCTCAATGGTGTC---CGAACTTTCCACTTCAAGGGTAACCGTC 195108 | || ||||||| || || ||||| ||| || || || || || | |||| Sbjct 1356 ACCTTGGACTTGACGACGTCGATCGTGTCGCTCGA---CTCGACCTCGAGCGTGATCGTC 1300 Query 195109 TTTCCTGTCAAAGTTTTTACGAACACTTGCAT 195140 || || || | || || | ||| | |||||| Sbjct 1299 TTGCCCGTGAGCGTCTTGATGAAGATTTGCAT 1268 >seq1084 Length=2791 Score = 89.7 bits (98), Expect = 1e-12 Identities = 97/129 (75%), Gaps = 0/129 (0%) Strand=Plus/Minus Query 194928 CAAAACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATC 194987 |||||| ||||| || || ||||| || || || ||||| ||| || || | ||| || Sbjct 388 CAAAACGAGGTGCAGCGTAGACTCCTTCTGGATGTTGTAGTCGCTCAGCGTGCGCCCGTC 329 Query 194988 TTCGAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTC 195047 ||||||||||| || || ||||| || || || || || || |||||||| || ||||| Sbjct 328 CTCGAGCTGCTTGCCGGCAAAGATGAGGCGCTGCTGATCGGGCGGAATGCCCTCCTTGTC 269 Query 195048 TTGAATTTT 195056 || || || Sbjct 268 CTGGATCTT 260 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1109457519395298