Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Malassezia_20furfur_20[genbank_20GCA_5F001265045.1_202015-08-11] 1,694 sequences; 7,877,641 total letters Query= NC_028093.1 Length=182309 Score E Sequences producing significant alignments: (Bits) Value seq946 141 1e-28 seq1091 107 2e-18 seq876 82.4 9e-11 >seq946 Length=5161 Score = 141 bits (156), Expect = 1e-28 Identities = 566/871 (65%), Gaps = 29/871 (3%) Strand=Plus/Plus Query 104221 CCCACAGTACATGTTCATGCGCGTGGCCATCGGTATTCATGGGGAAGACATTGATTCTGT 104280 ||| ||| ||||| ||||||| ||||| | || || || || ||| | || | Sbjct 902 CCCCCAGCACATGCTCATGCGTGTGGCGGTGGGCATCCACGGCACCGACGTCGAGAGCGC 961 Query 104281 CTTGGAGACATACGACAAGATGTCCCAAGGTATG--TTCATTCACGCAACACCAACCCTC 104338 | ||||| ||| ||| |||||| | | | | || | ||||| | || || || Sbjct 962 TATCGAGACGTACAACATGATGTCGGA--GAAGGCCTTTACGCACGCCTCGCCGACGCTT 1019 Query 104339 TTCAATGCTGGTACACCAAGACCCCAAATGTCCAGTTGCTTCCTTATCGCCAACAAGGAG 104398 ||||| || || || ||||| ||||| ||||| |||||||| | || ||||| Sbjct 1020 TTCAACGCGGGCACGCCAAGCCCCCAGATGTCGTCGTGCTTCCTGGTGTGCATGAAGGAC 1079 Query 104399 GACTCAATCAACGGTATCTATGGAACTCTTACGGAGTGTGCGCAAATCTCAAAGTGGGCT 104458 ||||| ||| | || ||||| | || || | | ||||||| ||||| ||| ||| Sbjct 1080 GACTCGATCGAGGGCATCTACGACACGCTCAAGTCGTGTGCGATGATCTCCAAGACGGCG 1139 Query 104459 GGGGGTATTGGGATGCACATCCA-TG-ATGTGAGAGCCAATAAATCTCGTA--TTCGGGG 104514 || || ||||| | |||| || || || | | | |||||| || || Sbjct 1140 GGCGGCATTGGTCTCAACATTCACTGCATCCGCGGTACGGG----CTCGTACATTGCCGG 1195 Query 104515 GACAAATGGTCA-ATCAGATGGTATTATTCCAATGCTTCGCGTATTTAACGCCACAGCGC 104573 || || ||| | || | || ||| | || ||||| ||||| | ||| ||| |||| Sbjct 1196 CACGAACGGTGTGAGCA-ACGGCATTGTGCCCATGCTCCGCGTGTACAACAACACGGCGC 1254 Query 104574 GCTATGTAAATCAAGCTGGGCGTCGAAAG----GGATCTATCGCAGTCTATCTTGAGCCA 104629 |||| || | || | ||| | | | | || | | || |||| || ||||| Sbjct 1255 GCTACGTCGACCAGGGTGG-CAACAAGCGCCCTGGTGCGTTTGCCATCTACCTCGAGCCG 1313 Query 104630 TGGCACGCGGATATCATGGAGTTCCTTGAGTTGCGTCTCAACCAAGGTGACGAGGAGGCG 104689 |||||| |||| | | ||||| | || |||| ||||| || | || |||| | Sbjct 1314 TGGCACTCGGACGTGTTTGAGTTTATCGACCTGCGCAAGAACCACGGCAAGGAAGAGGTG 1373 Query 104690 CGGTGCCGCGATCTCTTCTCCGCTCTCTGGATTCCAGATCTCTTCATGAAGAGAGTTGAG 104749 || ||||| || || | ||| || ||| | || || || || ||| | || ||| Sbjct 1374 CGCGCGCGCGACCTGTTTTACGCGCTGTGGGTGCCCGACCTGTTTATGCGCCGTGTCGAG 1433 Query 104750 GAGAGTGGCAATTGGTCTCTCTTTTGTCCAGACAAGGCACCTGGTCTCTCCGA-TGCCGT 104808 || | ||| | ||| | || | || || | | |||| || || || |||| ||| | Sbjct 1434 CAGGGCGGCGACTGGACGCTGATGTGCCCCGCCGAGGCGCCCGGCCTGGCCGACTGCTAT 1493 Query 104809 GGGTGAGGAGTTTGAAGCCCTTTACACAAAGTACGAGGAAGAAGGTCG-GGCGACTGCGA 104867 || || |||||||| || || ||| |||||| || || || ||| | || | Sbjct 1494 GGC-GAAGAGTTTGACGCGCTGTACGAGCGCTACGAGCGCGAGGGCCGCGGCAAGCGC-A 1551 Query 104868 CGGTGCCAGCTGCCGATG-TGTGGAAAGCTATTCTCAAGTCTCAAACCGAGACTGGTACA 104926 | || | || || || | | ||| | || || ||| || | || | |||||| || || Sbjct 1552 CCGT-CAAGGCGCAGAAGCTCTGGTACGCGATCCTCGAGGCGCAGATCGAGACGGGCACG 1610 Query 104927 CCATACATGCTTTACAAAGACGCCTGTAACCAAAAGAGTAATCAAAAGAATTTGGGTGTG 104986 || | ||||| ||||| || ||| |||| ||||| || || ||||| | || ||| Sbjct 1611 CCGTTTATGCTCTACAAGGATGCCGCGAACCGCAAGAGCAACCAGAAGAACGTCGGCGTG 1670 Query 104987 ATCAAGAGTTCCAATCTCTGTACAGAAATCTTGGAATTTACAG--ACAAAGATGAGACGG 105044 |||||||| || || || || || || || |||| ||||| || ||||||| Sbjct 1671 ATCAAGAGCTCGAACCTGTGCACCGAGATTATGGA--GTACAGCTCGCCGGACGAGACGG 1728 Query 105045 CTGTGTGTAACCTCGCATCAATCGCTCTCCC 105075 | ||||| |||||||| || ||||| ||||| Sbjct 1729 CGGTGTGCAACCTCGCCTCGATCGCGCTCCC 1759 >seq1091 Length=2794 Score = 107 bits (118), Expect = 2e-18 Identities = 117/153 (76%), Gaps = 2/153 (1%) Strand=Plus/Plus Query 94804 GAGCGACTCTTCGCATTTGCGTGTGTTGAGGGTATCTTCTTCTCTGGTTCCTTCTGCG-C 94862 ||||| || | || ||||| || ||||| ||||||||||| || || ||| ||| | Sbjct 2150 GAGCGCCTTGTGGCGTTTGCCGCCGTCGAGGGCATCTTCTTCTCGGGGTCGTTC-GCGTC 2208 Query 94863 TATTTATTGGCTCAAGAAGCGAGGTCTCATGCCAGGTCTCTGCTTCTCCAACGAGCTTAT 94922 || | |||||||||||||| ||||| ||||| || || | ||||| |||||||| || Sbjct 2209 GATCTTCTGGCTCAAGAAGCGCGGTCTGATGCCCGGCCTGTCGTTCTCGAACGAGCTCAT 2268 Query 94923 CTCTCGTGACGAGGGACTCCACCAAGAGTTTGC 94955 ||| ||||||||||| || ||| || ||||| Sbjct 2269 CTCGCGTGACGAGGGTCTGCACACCGACTTTGC 2301 >seq876 Length=7149 Score = 82.4 bits (90), Expect = 9e-11 Identities = 199/298 (67%), Gaps = 10/298 (3%) Strand=Plus/Plus Query 169160 TTGAGAATGAGACCCTTGATGTGGGAACCGTCGTTATCGGCATCCGTCATGATCATGAGA 169219 |||| || || ||||||||||| || ||||| || || ||||||||||| ||| Sbjct 2251 TTGATGATCAGGCCCTTGATGTGCGACCCGTCAAAGTCCTGGTCGGTCATGATCATCAGA 2310 Query 169220 CGACCATACCGAAGCTCGGAAACATCTTGATAGTCCTTACCCTGTTGAAGACCCAAGATC 169279 | || || || ||| | || | |||| ||| || || || || |||| |||| Sbjct 2311 CTGCCGTAGCGCAGCCCATCGACCGAGTCGTAGTGCTTGCCGTGCTGCAGCCCCAGGATC 2370 Query 169280 TTCTTGAGATCGTTGAACTC----TTGGT-TTGATGTGAGCTGTGTGACAGAGGCATCGC 169334 | |||| | |||| ||| ||| | ||||| || ||| | | || |||| Sbjct 2371 TCTTTGATGTTTTTGATCTCGGCATTGTTCTTGATC-GACTCGTGCGTC----GCCTCGC 2425 Query 169335 GAACATTCTTACACTTCCCACGAAGAGGGAAGACACCGTAGTGATCACGACCAACGACGG 169394 | ||||| ||| || || || || || || ||||| || || || || || Sbjct 2426 GCACATTGAGCAGCTTGCCGCGCAGCGGAAACACGCCGTACGCGTCGCGGCCCACCTCGC 2485 Query 169395 AGAGACCCGCGACTGCGAGAGTCTTCGCCGAGTCACCCTCGGTGACGATGAGCGTACA 169452 ||||||| || ||||| | ||| ||||||||||||||||||| ||| ||||| || Sbjct 2486 TCAGACCCGACACGGCGAGCGCCTTGGCCGAGTCACCCTCGGTGAGGATCAGCGTGCA 2543 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 583248449452560