Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Malassezia_20furfur_20[genbank_20GCA_5F001265045.1_202015-08-11] 1,694 sequences; 7,877,641 total letters Query= NC_033780.1 Length=144510 Score E Sequences producing significant alignments: (Bits) Value seq1256 172 5e-38 seq785 150 2e-31 seq1529 147 2e-30 seq1084 123 2e-23 >seq1256 Length=1729 Score = 172 bits (190), Expect = 5e-38 Identities = 167/212 (79%), Gaps = 2/212 (1%) Strand=Plus/Minus Query 41653 CACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAGAGGGTGCGCTCGTCGTC 41712 ||| || || ||||| ||||||||| ||||| |||||| ||| ||||| |||| || Sbjct 1477 CACAAGGTGGAGCGTCGACTCCTTCTGGATGTTGTAGTCGCTGAGCGTGCGGCCGTCTTC 1418 Query 41713 GAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGAACGCTCTCCTTGTCCAT 41772 |||||||||||| || || ||||||||||||||||||| ||| | || |||||||||| Sbjct 1417 GAGCTGCTTGCCCGCAAAGATCAGGCGCTGTTGGTCCGGGGGGATGCCCTCCTTGTCCTG 1358 Query 41773 GATTTTTTGCTTCAACGACGAC-ACAGTGTCGCTCGACTCCACCTCCACCGTTATCGTTT 41831 || || ||| |||||| | | |||||||||||||| ||||| | ||| ||||| | Sbjct 1357 GACCTTGGACTT-GACGACGTCGATCGTGTCGCTCGACTCGACCTCGAGCGTGATCGTCT 1299 Query 41832 TACCCGTCAGCGTCTTTACGAAAATCTGCATG 41863 | ||||| |||||||| | ||| || |||||| Sbjct 1298 TGCCCGTGAGCGTCTTGATGAAGATTTGCATG 1267 >seq785 Length=12362 Score = 150 bits (166), Expect = 2e-31 Identities = 170/228 (75%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 41636 CCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAG 41695 || || || || || | ||| || |||||||| ||||||||| ||||| |||||| | Sbjct 468 CCACCACGCAGGCGGAGCACAAGGTGCAGCGTCGACTCCTTCTGGATGTTGTAGTCGCTG 409 Query 41696 AGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGA 41755 || ||||| | || ||||||||||| ||||| || ||||||||||||||||||| ||| Sbjct 408 AGCGTGCGGCCATCCTCGAGCTGCTTACCGGCAAAGATCAGGCGCTGTTGGTCCGGAGGA 349 Query 41756 ACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGACGACACAGTGTCGCTCGACTCCACC 41815 | || |||||||||| ||| || ||| | | | ||||| |||||| ||| Sbjct 348 ATGCCCTCCTTGTCCTGGATCTTGGCCTTGACATTCTCGATGGTGTCCGACGACTCGACC 289 Query 41816 TCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCATG 41863 || | || ||||| |||||||| || ||||| ||||| | |||||| Sbjct 288 TCGAGGGTAATCGTCTTACCCGTGAGGGTCTTGACGAACACTTGCATG 241 >seq1529 Length=23778 Score = 147 bits (162), Expect = 2e-30 Identities = 159/211 (75%), Gaps = 0/211 (0%) Strand=Plus/Plus Query 41654 ACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAGAGGGTGCGCTCGTCGTCG 41713 |||| || ||||| ||||||||| ||||| |||||| ||||| || | || ||| Sbjct 2 ACCAAGTGAAGCGTCGACTCCTTCTGGATGTTGTAGTCGCTCAGGGTACGACCATCCTCG 61 Query 41714 AGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGAACGCTCTCCTTGTCCATG 41773 ||||||||||| || || || |||||||||||||||| ||||| || ||||||||| | Sbjct 62 AGCTGCTTGCCTGCAAAGATAAGGCGCTGTTGGTCCGGGGGAATGCCCTCCTTGTCTTGG 121 Query 41774 ATTTTTTGCTTCAACGACGACACAGTGTCGCTCGACTCCACCTCCACCGTTATCGTTTTA 41833 || ||| ||| | | | |||||| |||||| || || | || ||||| || Sbjct 122 ATCTTTGCCTTGACGTTCTCGATCGTGTCGGACGACTCGACTTCGAGTGTGATCGTCTTT 181 Query 41834 CCCGTCAGCGTCTTTACGAAAATCTGCATGT 41864 || ||||| ||||||||||||| |||||||| Sbjct 182 CCTGTCAGAGTCTTTACGAAAACCTGCATGT 212 >seq1084 Length=2791 Score = 123 bits (136), Expect = 2e-23 Identities = 113/143 (79%), Gaps = 0/143 (0%) Strand=Plus/Minus Query 41636 CCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAG 41695 |||||||| || || || || || |||||||| ||||||||| ||||| |||||| Sbjct 402 CCGCCGCGCAGGCGCAAAACGAGGTGCAGCGTAGACTCCTTCTGGATGTTGTAGTCGCTC 343 Query 41696 AGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGA 41755 || |||||| |||| ||||||||||||||||| || || |||||||| || || | ||| Sbjct 342 AGCGTGCGCCCGTCCTCGAGCTGCTTGCCGGCAAAGATGAGGCGCTGCTGATCGGGCGGA 283 Query 41756 ACGCTCTCCTTGTCCATGATTTT 41778 | || |||||||||| ||| || Sbjct 282 ATGCCCTCCTTGTCCTGGATCTT 260 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 462294210712800