Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Malassezia_20furfur_20[genbank_20GCA_5F001265055.1_202015-08-11] 3,460 sequences; 13,865,456 total letters Query= NC_000852.5 Length=330611 Score E Sequences producing significant alignments: (Bits) Value seq1276 129 1e-24 seq3271 107 4e-18 seq1277 107 4e-18 seq2953 102 2e-16 >seq1276 Length=1557 Score = 129 bits (142), Expect = 1e-24 Identities = 409/630 (65%), Gaps = 12/630 (2%) Strand=Plus/Minus Query 319401 CTTCACGAACTCGGACAGATTTCCCTTGTACTTCTTCAGCTTTAGGTTAGGTTCGTAATG 319460 |||||||||| | ||| || ||| ||| ||| | ||| | | ||||| | || Sbjct 928 CTTCACGAACGCATCCAGGTTGCCCGGGTAACGCTTGATCTTGAAGC--GGTTCA-AGTG 872 Query 319461 GATAATAGAGGTGCAAACAGCGTCGAGGAACCCGGAGTCGTGTGACACAATCACGCACGA 319520 || ||| ||| || || ||| ||||||| ||||||||| || ||||| | ||| Sbjct 871 GAGAATGTCGGTACACACGTCGTTGAGGAACTTGGAGTCGTGCGAGACAATGATCGACGT 812 Query 319521 AACGTCCTTAAGGTTGATCAGGTATTCAATCAACCACCTCACGTTAGACACAGAAAGATG 319580 || | || || | ||||| || | | |||| | ||||| |||| | || Sbjct 811 GGTCTCGGTGAGACTGTTGAGGTAGTCCGTGATCCACTTGACGTTGATCACATCCAAGTG 752 Query 319581 GTTGGTCGGCTCGTCAAGAAGCAGTAGCTTTGCGTTCAGGAGCATTGCACGTGCAAGAGC 319640 ||| |||||||||||||| || || | | || || | |||| ||||| || || || Sbjct 751 GTTCGTCGGCTCGTCAAGCAGAAGAATGTCGGCCTTGAACAGCACCGCACGCGCCAGGGC 692 Query 319641 GAGTTTCATTTTCCACCCTCCGGAAAGAGTGTTAATTGGGGCAGATTGGCGCTCAATATC 319700 ||| ||||| ||||| || || || || | |||| || ||| ||||||| ||| Sbjct 691 GAGCTTCATCTTCCAGCCACCCGAGAGCGCCGTAATGGGACCAGCCTGGCGCTGCTCATC 632 Query 319701 AAAGCCAACCGATTCTAGAGTAGTTACGATCTTTTCACGAGACCAAATGTTTTCCTTTAC 319760 ||||| | | | || ||| || |||| | | | || | || | Sbjct 631 GAAGCCCATC--TCCTTGAG------CG-TCTTGGCCGCCGTCTCGTGGTCGACGTTCAG 581 Query 319761 TTGTTCATCATTGGCAATGAAGTCAATGATAGCCGTGTTAGAATCGGACCCGTCGAGATC 319820 | | || | | |||||||| || || | ||| | || || |||||||| || Sbjct 580 GCGCTTGTCGGCGACGATGAAGTCGATAATGGAAATGTCACCCTCCGAGCCGTCGAGGTC 521 Query 319821 GTGTTCCACGTAAGCAGTTTTCAAAACATCCGCAGAGGGGAACCCTTCAAGCTGGCCGTT 319880 ||| || ||||| || || | || | |||||||| || |||| ||| ||||| Sbjct 520 GTGCTCGACGTACCAGGTGCGCACCTCGTCGGGCGAGGGGAAGCCCTCAACCTGACCGTT 461 Query 319881 CACAATAGCGCGCATCAGGGTTGATTTACCCGCCCCGTTTGGCCCACACAGACCGTAGCG 319940 | || ||||||||||| || || ||||||| ||||| | ||||||||||||||||| Sbjct 460 CTGGATGGCGCGCATCAGCGTCGACTTACCCGAACCGTTGCGGCCACACAGACCGTAGCG 401 Query 319941 GTTTCCGCGTTTCAGGTTGAACCGCGTGTTGTTCAGAAGAATTTTTCCACCATATGCCAG 320000 || || || || ||| | | || |||| || ||||| || |||| || || || Sbjct 400 GTGGCCACGCTTGAGGCGCAGCGTCGCCGTGTTGAGCAGAATCTTGGCACCGTAGGCGAG 341 Query 320001 AGAAAATTCACAATCACACAGATCCTCACC 320030 || || | || | ||||| || |||| Sbjct 340 CGAGAACTGGCAGTTGCACAGGTCGACACC 311 >seq3271 Length=3785 Score = 107 bits (118), Expect = 4e-18 Identities = 251/368 (68%), Gaps = 12/368 (3%) Strand=Plus/Minus Query 230239 ATCTTTTGGCTGCGGAACAAAGGTGTGATGCCTGGCCTCGGTCTGTCT--AACGAGTTCA 230296 ||||| |||||| ||| ||| ||||||| ||||| ||| ||| |||||| ||| Sbjct 587 ATCTTCTGGCTGAAGAAGCGCGGTCTGATGCCCGGCCT--GTCGTTCTCGAACGAGCTCA 530 Query 230297 TCAGTCGCGACGAGGGTCTCCATCAACAGTTCGGCGAGCTTA-TGTATTCAAAGCTCCAG 230355 || || ||||||||||| || || | | ||| || | ||| | | ||| || Sbjct 529 TCTCGCGTGACGAGGGTCTGCA-CACCGACTTTGCGTGCCTGCTGTTTGGCCACCTCAAG 471 Query 230356 AA-CAAGCT-ACCATTCGAGACGGTCAAACAAATCATTACAGAAGCAGTTGAAAACGAAA 230413 || | || ||| ||| ||||| || | |||||||| || || || | | || Sbjct 470 AAGCGCGCGCACCC--CGACACGGTGAACCGCATCATTACCGAGGCGGTGGCGATTGAGC 413 Query 230414 AGGAGTTCATTTGTGACGCTATTCCA-TGTCGCCTTATTGGCATGAACGCTGAACTTATG 230472 | || ||| ||| ||||| | || |||||| | ||||||||||| || || ||| Sbjct 412 AAGACTTCCTTTCCGACGCGCTGCCCGTGTCGC-TGATTGGCATGAATGCGCGCCTGATG 354 Query 230473 GGACAGTACATCGAATTCGTAGCCGACCGCATTTTTGTTGCACTTGGTTACGAGAAAGTG 230532 | |||||||| || || || || |||||| | | || || || || || ||| Sbjct 353 TGCCAGTACATTGAGTTTGTGGCGGACCGCCTGCTCGTGGCGCTGGGCAACCCGAAGCAC 294 Query 230533 TACAACTCTAAGAACCCCTTTGCATTTATGGAGCTCATTTCGCTTCAAGGGAAGACCAAC 230592 |||||| | | ||||||||| | ||||||||| |||||||| || || ||| | ||| Sbjct 293 TACAACGCGACGAACCCCTTCGACTTTATGGAGAATATTTCGCTGCAGGGCAAGTCGAAC 234 Query 230593 TTCTTCGA 230600 || ||||| Sbjct 233 TTTTTCGA 226 >seq1277 Length=1557 Score = 107 bits (118), Expect = 4e-18 Identities = 411/640 (64%), Gaps = 13/640 (2%) Strand=Plus/Minus Query 319391 CGGGACGCTTCTTCACGAACTCGGACAGATTTCCCTTGTACTTCTTCAGCTTTAGGTTAG 319450 ||| |||| |||||||||| || ||| || ||| ||| ||| | ||| | | | Sbjct 937 CGGCACGCG-CTTCACGAACGCGTCCAGGTTGCCCGGGTAGCGCTTGATCTTGAAGC--G 881 Query 319451 GTTCGTAATGGATAATAGAGGTGCAAACAGCGTCGAGGAACCCGGAGTCGTGTGACACAA 319510 |||| |||| ||| ||| || || ||| |||||| ||||||||| ||||||| Sbjct 880 GTTCAGG-TGGAGAATGTCGGTACACACGTCGTTCAGGAACTTGGAGTCGTGCGACACAA 822 Query 319511 TCACGCACGAAACGTCCTTAAGGTTGATCAGGTATTCAATCAACCACCTCACGTTAGACA 319570 | | ||| || | ||| || | ||||| || | | |||| | ||||| | Sbjct 821 TGATCGACGTGGTCTCGGTGAGGCTGTTGAGGTAGTCGGTGATCCACTTGACGTTGATGA 762 Query 319571 CAGAAAGATGGTTGGTCGGCTCGTCAAGAAGCAGTAGCTTTGCGTTCAGGAGCATTGCAC 319630 | | ||||| ||||||||||| || ||||| | | || || | |||| |||| Sbjct 761 CGTCCAAGTGGTTCGTCGGCTCGTCGAGCAGCAGAATATCGGCCTTGAACAGCACCGCAC 702 Query 319631 GTGCAAGAGCGAGTTTCATTTTCCACCCTCCGGAAAGAGTGTTAATTGGGGCAGATTGGC 319690 | || || ||||| ||||| ||||| || || || || | | || || ||| |||| Sbjct 701 GCGCCAGGGCGAGCTTCATCTTCCAGCCACCCGAGAGCGCCGTGATCGGACCAGCCTGGC 642 Query 319691 GCTCAATATCAAAGCCAACCGATTCTAGAGTAGTTACGATCTTTTCACGAGACCAAATGT 319750 ||| || ||||| | | | || ||| || |||| | | | || Sbjct 641 GCTGCTCGTCGAAGCCCATC--TCCTTGAG------CG-TCTTGGCCGCCGTCTCGTGGT 591 Query 319751 TTTCCTTTACTTGTTCATCATTGGCAATGAAGTCAATGATAGCCGTGTTAGAATCGGACC 319810 | || | | | || | | |||||||| | || | ||| | || || | Sbjct 590 CGACGTTCAGGCGCTTGTCGGCGACGATGAAGTCGAGAATGGAGATGTCACCCTCCGAGC 531 Query 319811 CGTCGAGATCGTGTTCCACGTAAGCAGTTTTCAAAACATCCGCAGAGGGGAACCCTTCAA 319870 ||||||| ||||| || ||||| || || | || | |||||||| || || | Sbjct 530 CGTCGAGGTCGTGCTCGACGTACCAGGTACGCACCTCGTCGGGCGAGGGGAAGCCCTCGA 471 Query 319871 GCTGGCCGTTCACAATAGCGCGCATCAGGGTTGATTTACCCGCCCCGTTTGGCCCACACA 319930 |||||||||| || |||||||||| || || || |||| ||||| | ||||||| Sbjct 470 CCTGGCCGTTCTGGATGGCGCGCATCAACGTCGACTTGCCCGAACCGTTGCGGCCACACA 411 Query 319931 GACCGTAGCGGTTTCCGCGTTTCAGGTTGAACCGCGTGTTGTTCAGAAGAATTTTTCCAC 319990 |||||||||||| || || || ||| | | || |||| || ||||| || ||| Sbjct 410 GACCGTAGCGGTGGCCACGCTTGAGGCGCAGCGTCGCCGTGTTGAGCAGAATCTTGGCAC 351 Query 319991 CATATGCCAGAGAAAATTCACAATCACACAGATCCTCACC 320030 | || || || || || | ||| | ||||| || |||| Sbjct 350 CGTAGGCGAGCGAGAACTGACAGTTGCACAGGTCGACACC 311 >seq2953 Length=7094 Score = 102 bits (112), Expect = 2e-16 Identities = 373/571 (65%), Gaps = 25/571 (4%) Strand=Plus/Plus Query 281742 GTGAAGATATACCTTGCACTCGCGTGGTCTTTACCACCC-TGCAGCCTCGACCCAAACTG 281800 |||||||| || | ||||| || ||| || || ||| || ||| || || ||||| Sbjct 1451 GTGAAGATGTAACGCGCACTGGCCGCGTCCTTGCCGCCCATGGAGCG-CGTACCGAACTG 1509 Query 281801 ACCCTCCGGCAACAACCAGTTAATGTTATTGCTCCCGACGTAATCCTGAGCCAGGTTGAC 281860 || | |||| | | ||| | ||| ||||||||| | | ||||| || ||| ||| Sbjct 1510 GCCGTTGGGCATGAGCATGTTGACGTTGTTGCTCCCGCAGAAGTCCTGCGCAAGGCCGAC 1569 Query 281861 GATTGTCCCCTGAAGCGATACCTCACCGTGGTGATAGGCGCTGTGTTCGGCAACATAACC 281920 ||| ||| | || || ||||||||||||||| |||| || || || || || Sbjct 1570 GATGGTCATCACCAGGCTCTGGTCGCCGTGGTGATAGGCGGTGTGCTCCGCGACGTAGCC 1629 Query 281921 ACTGAA-CTG-TGCTACCTTCACGTCTGATGTCAAGTTGCGTTTGAAAGCGCAATATAAT 281978 ||| | ||| ||| ||||| | || | | | |||||| ||||| || | | | Sbjct 1630 -CTGCAGCTGCTGC-ACCTTGATTTCGGTCTTGAGGTTGCGCTTGAAGCAGCCAAACAGC 1687 Query 281979 ACTTTTCGTTGAGAAGGCTTGAAACCATCAACGACAGACGGAATGCTGCG----TTCCAG 282034 || || || || ||||| || || || || || ||||| ||| ||| || | Sbjct 1688 ACCTTGCGCTGCCCGGGCTTCAAGCCGTCGACCACCGACGGGATGGAGCGGATGTTGTCG 1747 Query 282035 GTCATACCGCGAGAACAAAATAAGTTCCTTGTCAATGAAGTCGGGAACGGGAACCTCGGG 282094 | ||| |||||| | || || ||||||| || ||||||| | ||| | || | | Sbjct 1748 GCCAT----CGAGAAGAGGATCAGCTCCTTGTTGATAAAGTCGGCGATGGGGATCTGGCG 1803 Query 282095 CTTCTTGTGGTCAAGTTGGTTTCCCGGCTCGTA-TGCCGTCATCCACTCCTTGCGATCCT 282153 | ||||||||| | | | || ||| | | || || || |||||||||||| || | Sbjct 1804 GATGCGGTGGTCAAGGTAGGTGCCGGGCACAAACTGGCG-CAGCCACTCCTTGCGGTCGT 1862 Query 282154 CGGCCCGAGTCTTGTTGAAAGAACGATCGATGAGCTCTCCAGAATCAGAAGTCCACGT-- 282211 ||||| |||||||||| | | || | ||||| | | | || ||| Sbjct 1863 CGGCCTTCTTCTTGTTGAACGCGAGGTCCACAAGCTCGCGGTCGCCGGGCTTCATCGTCT 1922 Query 282212 -AAACGTCTTCATAAGAGTCTTCAGGTTGCTGAAGTAATGCT---TGGCATCAGTGCTGG 282267 |||| ||| | || | || ||||| |||||| | || || | || | ||| Sbjct 1923 CGAACGAGAGCATGTGCGTGTCCATGTTGCGGAAGTACTTCTTCATGTCCTCCGCCTTGG 1982 Query 282268 AACTCGTACCGAGACCCTTGTAATACTTGAT 282298 | |||||||||||||||||| |||||||| Sbjct 1983 A---CGTACCGAGACCCTTGTAGTACTTGAT 2010 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1057777105339800