Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Malassezia_20furfur_20[genbank_20GCA_5F001265055.1_202015-08-11] 3,460 sequences; 13,865,456 total letters Query= NC_002687.1 Length=335593 Score E Sequences producing significant alignments: (Bits) Value seq3093 156 9e-33 seq1453 113 1e-19 seq1460 98.7 2e-15 seq2774 86.0 1e-11 >seq3093 Length=5234 Score = 156 bits (172), Expect = 9e-33 Identities = 439/669 (66%), Gaps = 15/669 (2%) Strand=Plus/Plus Query 248833 TTCAAAACGCTGGAGAAATCGTATCTCCTCAAAATTGATGGCAAGATCGTGGAACGAATT 248892 ||||| ||||| ||| ||||| || || || | |||||| | | || || Sbjct 936 TTCAAGACGCTTGAGCGCTCGTACCTGCTGCGCATCAACGGCAAGGTGGCCGAGCGCCCC 995 Query 248893 CAGCACATGTTGATGCGAGTGGCTGTCGGGATTCACAAGGATGACATAGAGAGCGTGCTC 248952 ||||||||| | ||||| ||||| || || || ||| ||| | ||||||| | || Sbjct 996 CAGCACATGCTCATGCGTGTGGCGGTGGGCATCCACGGCACCGACGTCGAGAGCGCGATC 1055 Query 248953 GAGACGTACACCGGAATGA--GTGAACGCTGGATGACACATGCCACACCGACGCTCTTCA 249010 |||||||||| | ||| | ||| || | || || ||| | ||||||||||||| Sbjct 1056 GAGACGTACAACATGATGTCGGAGAAGGCCT--TTACGCACGCCTCGCCGACGCTCTTCA 1113 Query 249011 ACGCCGGTACCGTCAACAATCAGCTGAGCTCGTGCTTTCTTCTTGCCATGCAAGACGACT 249070 |||| || || | | ||| || |||||||| || | |||| | ||||||| Sbjct 1114 ACGCGGGCACGCCGAGCCCGCAGATGTCGTCGTGCTTCCTGGTGTGCATGAAGGACGACT 1173 Query 249071 CTGTCGACGGCATTTATGACACGCTTAAACAGACGGCGAAGATTTCTAAATTCGCGGGCG 249130 | |||| ||||| || |||||||| || | |||| ||| || || ||||||| Sbjct 1174 CGATCGAGGGCATCTACGACACGCTCAAGTCGTGTGCGATGATCTCCAAGACGGCGGGCG 1233 Query 249131 GAATCGGTCTCTCCGTCTCCAACATCCGAGCGAAGGGTTCGTACATCAAAGGTACAAATG 249190 | || |||||| | || | |||||| | | ||| |||||||| || || || | Sbjct 1234 GCATTGGTCTCAACATCCACTGCATCCGCGGCACGGGCTCGTACATTGCCGGCACGAACG 1293 Query 249191 GGGTCAGTGATGGTATCGTACCCCTCCTTCGATGCTTTGAGTCCACCGCCAGGTTCATCA 249250 | || || | || || || ||| | || || | | ||| || | | | || Sbjct 1294 GTGTGAGCAACGGCATTGTGCCCATGCTCCGCGTGTACAACAACACGGCGCGCTACGTCG 1353 Query 249251 ACCAGGCCGG------GCGCCGAAAGGGGTCGTTCGCCATGTATTTGGAAGTGTGGCACG 249304 |||||| || ||||| || | || ||||| || | || ||||||| Sbjct 1354 ACCAGGGTGGCAACAAGCGCC---CCGGCGCCTTTGCCATCTACCTCGAGCCGTGGCACT 1410 Query 249305 CCGATATATTGGAGTTCCTGGACTTGAAAAAGAACAACGGCAACGAGCTCATGAGAGCGC 249364 | || | || ||||| | ||| || |||||| ||||||| || || | |||| Sbjct 1411 CGGACGTGTTTGAGTTTATCGACCTGCGCAAGAACCACGGCAAGGAAGAGGTGCGCGCGC 1470 Query 249365 GTGACCTCTTCTACGGCCTGTGGGTCTCCGACTTGTTCATGCGCCGCGTCAAGGCCGACG 249424 | ||||| ||||||| |||||||| | ||| |||| |||||||| ||| || | || Sbjct 1471 GCGACCTGTTCTACGCGCTGTGGGTGCCGGACCTGTTTATGCGCCGTGTCGAGCAGGGCG 1530 Query 249425 GCGATTGGACGCTTCTTTCTCCGTCCGACGCCCCGGACCTCATCGATCTAC-ACGGCGCC 249483 |||| |||||||| | | || |||| || || | |||| ||| || | |||||| Sbjct 1531 GCGACTGGACGCTGATGTGCCCCGCCGAGGCGCCCGGCCTCGCCGA-CTGCTACGGCGAG 1589 Query 249484 GACTTCGAC 249492 || || ||| Sbjct 1590 GAGTTTGAC 1598 >seq1453 Length=1287 Score = 113 bits (124), Expect = 1e-19 Identities = 189/266 (71%), Gaps = 8/266 (3%) Strand=Plus/Plus Query 254011 TGCTTTTCCACGGTCCTCCCGGAACAGGCAAGACGTCAACCATCCTGGCGCTGGCCCGAA 254070 |||| ||| |||| || ||||| || ||||||||||| || ||| ||||||| || || Sbjct 162 TGCTGTTCTACGGCCCGCCCGGCACGGGCAAGACGTCGACGATCATGGCGCTCGCGCGCC 221 Query 254071 CCCTGTTGGGCGAGGGGAACATGAGAGAGCGCGTGCTCGAGCTGAACGCTTCTGACGAAC 254130 |||| ||| || | || || | | |||||||||||||||||| || ||||| | Sbjct 222 GGCTGTACGGCAAGCAGTTCAAGA---ACCACGTGCTCGAGCTGAACGCGTCCGACGACC 278 Query 254131 GCGGGTTGGACGTCGTCCGCGACAAGATCAAGACTTTCTCCAAGATGTCGATTTCGTCGT 254190 |||| | |||||||| |||| |||||||| | ||| | | | | || ||| || Sbjct 279 GCGGCATCGACGTCGTGCGCGGGCAGATCAAGTCGTTCGCGAGCACG-CG-CAACGT-GT 335 Query 254191 TC-CAACCCGGCTGTCCGCCTTTCAAGCTCGTGATCCTGGACGAGGCGGACACCATGACG 254249 || || | || | | | |||||||| | | || |||||||| ||| |||||||| Sbjct 336 TCAGCACGCAGCAGGAC-ACGTTCAAGCTGATCGTGCTCGACGAGGCCGACGCCATGACG 394 Query 254250 GCCGACGCGCAGTCCGCCCTCCGCCG 254275 | ||||||| |||| ||||| || Sbjct 395 CAGGCCGCGCAGGCCGCGCTCCGGCG 420 >seq1460 Length=1279 Score = 98.7 bits (108), Expect = 2e-15 Identities = 233/341 (68%), Gaps = 12/341 (4%) Strand=Plus/Plus Query 254011 TGCTTTTCCACGGTCCTCCCGGAACAGGCAAGACGTCAACCATCCTGGCGCTGGCCCGAA 254070 |||| ||| |||| || || || || ||||||||||| || ||| ||||||| || || Sbjct 222 TGCTCTTCTACGGCCCGCCGGGCACGGGCAAGACGTCGACGATCATGGCGCTCGCGCGCC 281 Query 254071 CCCTGTTGGGCGAGGGGAACATGAGAGAGCGCGTGCTCGAGCTGAACGCTTCTGACGAAC 254130 |||| || || | || || | | |||||| ||||||||||| || ||||| | Sbjct 282 GGCTGTACGGGAAGCAGTTCAAGA---ACCACGTGCTGGAGCTGAACGCGTCCGACGACC 338 Query 254131 GCGGGTTGGACGTCGTCCGCGACAAGATCAAGACTTTCTCCAAGATGTCGATTTCGTCGT 254190 |||| | |||||||| |||| |||||||| | ||| | | | | || ||| || Sbjct 339 GCGGCATCGACGTCGTGCGCGGGCAGATCAAGTCGTTCGCGAGCACG-CG-CAACGT-GT 395 Query 254191 TC-CAACCCGGCTGTCCGCCTTTCAAGCTCGTGATCCTGGACGAGGCGGACACCATGACG 254249 || || | || | | | |||||||| | | || |||||||||||| |||||||| Sbjct 396 TCAGCACACAGCAGGAC-ACGTTCAAGCTGATCGTGCTCGACGAGGCGGACGCCATGACG 454 Query 254250 GCCGACGCGCAGTCCGCCCTCCGCCGAACGATGGAGACGCACTCCGTTGTGAC--GCGTT 254307 | |||||| | || ||||| || ||| ||| | || || | || ||| | Sbjct 455 CAGGCGGCGCAGGCGGCGCTCCGGCGCGTGATCGAGCAGTAC-ACGAAG-AACGTGCGCT 512 Query 254308 TTTGCCTGGTGTGCAACTACGTGTCGAAGATCATCGCCCCG 254348 | ||| | | ||||||||||| ||||||||| || || Sbjct 513 TCTGCATCATCTGCAACTACGTCAACAAGATCATCCCCGCG 553 >seq2774 Length=37484 Score = 86.0 bits (94), Expect = 1e-11 Identities = 94/125 (75%), Gaps = 0/125 (0%) Strand=Plus/Plus Query 115402 ATCGCACATCTGCTCTGAATCGGTTCGATGATTTTGGTGGAGTTGTTGCAGACTATGATG 115461 |||||||| | |||||||||||||| ||||| ||| |||| | |||||| | | | | Sbjct 878 ATCGCACAGCGACTCTGAATCGGTTCAATGATCTTGTTGGACTGGTTGCACGCGAAGCAG 937 Query 115462 AACCGCGTCGTGCTCGAGTAAACATCCATGATCCGTCGCAGCGCCTGGAAAGCACCAGGT 115521 || ||||||||| | | |||| ||||| | || || |||||||| ||||| ||| Sbjct 938 AAGCGCGTCGTGTTGGCATAAATCTCCATCGTACGGCGTAGCGCCTGCTGCGCACCGGGT 997 Query 115522 GTCAT 115526 ||||| Sbjct 998 GTCAT 1002 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1073718798593280