Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Malassezia_20furfur_20[genbank_20GCA_5F001265055.1_202015-08-11] 3,460 sequences; 13,865,456 total letters Query= NC_002816.1 Length=123500 Score E Sequences producing significant alignments: (Bits) Value seq3452 109 4e-19 seq3388 109 4e-19 seq1050 93.3 3e-14 seq884 86.0 5e-12 seq1790 82.4 6e-11 >seq3452 Length=2631 Score = 109 bits (120), Expect = 4e-19 Identities = 96/120 (80%), Gaps = 0/120 (0%) Strand=Plus/Minus Query 45133 GTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTCCAGTTG 45192 ||| ||||| ||||||||| |||||||||||| |||| || |||| |||||||| Sbjct 413 GTGAAGCGTCGACTCCTTCTGGATGTTGTAGTCGCTCAGAGTACGCCCGTCTTCCAGTTG 354 Query 45193 TTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCCGCAATTTT 45252 || |||||||| |||| ||||||||||| ||||| | ||||||||||||| ||| || Sbjct 353 CTTACCGGCGAAGATCAGGCGCTGTTGGTCTGGAGGAATACCCTCCTTGTCCTGAATCTT 294 Score = 91.5 bits (100), Expect = 1e-13 Identities = 133/188 (71%), Gaps = 0/188 (0%) Strand=Plus/Minus Query 45128 ACCAAGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTCC 45187 |||||||| ||||| ||||||||| |||||||||||| |||| || | || || Sbjct 190 ACCAAGTGAAGCGTCGACTCCTTCTGGATGTTGTAGTCGCTCAGGGTACGGCCATCCTCA 131 Query 45188 AGTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCCGCA 45247 || || || || || || |||| ||||||||||| ||||| | |||||||| || | Sbjct 130 AGCTGCTTGCCCGCAAAGATCAGACGCTGTTGGTCCGGAGGAATGCCCTCCTTATCTTGA 71 Query 45248 ATTTTTTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTCTTG 45307 || || ||| || | | | |||| ||||| |||| |||||||||||| Sbjct 70 ATCTTCGCCTTCACGTTTTCAATGGTGTCAGACGATTCCACTTCCAATGTAATCGTCTTG 11 Query 45308 CCCGTCAG 45315 ||||| || Sbjct 10 CCCGTAAG 3 >seq3388 Length=2974 Score = 109 bits (120), Expect = 4e-19 Identities = 150/210 (71%), Gaps = 0/210 (0%) Strand=Plus/Plus Query 45128 ACCAAGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTCC 45187 |||| ||| ||||| ||||||||| |||||||||||| | || ||| |||| || Sbjct 507 ACCAGGTGGAGCGTCGACTCCTTCTGGATGTTGTAGTCGCTGAGCGTGCGGCCGTCCTCG 566 Query 45188 AGTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCCGCA 45247 || || || || || || || | |||||| ||||| || || | ||||||||||||| Sbjct 567 AGCTGCTTGCCCGCAAAGATGAGCCGCTGCTGGTCCGGGGGGATACCCTCCTTGTCCTGG 626 Query 45248 ATTTTTTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTCTTG 45307 | || ||| || | | | |||| | ||| ||||| | || ||||||||| Sbjct 627 ACCTTGGACTTGACGACGTCGATCGTGTCGCTCGACTCGACCTCGAGCGTGATCGTCTTG 686 Query 45308 CCCGTCAGAGTCTTCACAAAGATTTGCATG 45337 ||||| || ||||| | |||||||||||| Sbjct 687 CCCGTGAGCGTCTTGATGAAGATTTGCATG 716 >seq1050 Length=2041 Score = 93.3 bits (102), Expect = 3e-14 Identities = 144/206 (70%), Gaps = 0/206 (0%) Strand=Plus/Plus Query 45133 GTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTCCAGTTG 45192 ||| ||||| ||||||||| |||||||||||| |||| || | || || || || Sbjct 105 GTGAAGCGTCGACTCCTTCTGGATGTTGTAGTCGCTCAGGGTACGGCCATCCTCGAGCTG 164 Query 45193 TTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCCGCAATTTT 45252 || || || || |||| ||||||||||| ||||| | ||||||||||| || || Sbjct 165 CTTGCCCGCAAAGATCAGACGCTGTTGGTCCGGAGGAATGCCCTCCTTGTCTTGGATCTT 224 Query 45253 TTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTCTTGCCCGT 45312 | ||| || | | | |||| ||| || || | || |||||||| || || Sbjct 225 TGCCTTGACGTTCTCGATCGTGTCGGACGACTCGACTTCGAGTGTGATCGTCTTTCCTGT 284 Query 45313 CAGAGTCTTCACAAAGATTTGCATGT 45338 ||||||||| || || | ||||||| Sbjct 285 CAGAGTCTTTACGAAAACCTGCATGT 310 >seq884 Length=2618 Score = 86.0 bits (94), Expect = 5e-12 Identities = 91/120 (76%), Gaps = 0/120 (0%) Strand=Plus/Plus Query 45125 AATACCAAGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCG 45184 || || | ||||||||| ||||||||| |||||||||||| |||| ||| |||| Sbjct 2303 AAAACGAGGTGCAGCGTAGACTCCTTCTGGATGTTGTAGTCGCTCAGCGTGCGCCCGTCC 2362 Query 45185 TCCAGTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCC 45244 || || || || ||||| || || | ||||| || ||||| || | |||||||||||| Sbjct 2363 TCGAGCTGCTTGCCGGCAAAGATGAGGCGCTGCTGATCGGGCGGAATGCCCTCCTTGTCC 2422 >seq1790 Length=18119 Score = 82.4 bits (90), Expect = 6e-11 Identities = 90/120 (75%), Gaps = 0/120 (0%) Strand=Plus/Minus Query 45133 GTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTCCAGTTG 45192 ||| ||||| |||||||||||||||||||||| |||| || | || || || || Sbjct 135 GTGAAGCGTCGACTCCTTCTGAATGTTGTAGTCGCTCAGCGTACGGCCATCCTCAAGCTG 76 Query 45193 TTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCCGCAATTTT 45252 || || || || |||| ||||||||||| || || | |||||||||||| ||| || Sbjct 75 CTTACCAGCAAAGATCAGGCGCTGTTGGTCCGGGGGAATGCCCTCCTTGTCCTGAATCTT 16 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 395058540172660