Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Malassezia_20furfur_20[genbank_20GCA_5F001265055.1_202015-08-11] 3,460 sequences; 13,865,456 total letters Query= NC_003310.1 Length=196858 Score E Sequences producing significant alignments: (Bits) Value seq3271 98.7 1e-15 >seq3271 Length=3785 Score = 98.7 bits (108), Expect = 1e-15 Identities = 383/595 (64%), Gaps = 19/595 (3%) Strand=Plus/Plus Query 33572 AAACATCAAACATGCGAAATCGCAGTGCAGACCCTCGTCTCTACTAATTAATTCGTTAGA 33631 ||||| || || || || ||| ||||||||||||||| | || | ||||| || Sbjct 483 AAACAGCAGGCACGCAAAGTCGGTGTGCAGACCCTCGTCACGCGAGATGAGCTCGTTCGA 542 Query 33632 AAACGTGAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGAAGCGAATGATCC 33691 |||| || |||||||| || || ||||| || ||||| || || || || || || || Sbjct 543 GAACGACAGGCCGGGCATCAGACCGCGCTTCTTCAGCCAGAAGATCGAGGCAAACGAGCC 602 Query 33692 GGAAAAGAAGATTCCTTCTACTGCAGCAAAGGCAATAAGTCTCTCTCCATAAC------C 33745 || |||||||| || || || || ||||| || | ||| | ||| | | ||| | Sbjct 603 CGAGAAGAAGATGCCCTCCACGGCGGCAAACGCCACAAGGCGCTC-CGAGAACGACGCAC 661 Query 33746 GGCGCTGTCATGTATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATCGT 33805 |||| ||| ||||| | ||||| |||||||||| || || || ||||| Sbjct 662 GGCG--GTCGCTGATCCAGCGCAGCGCCCACTCGGCCTTCTGCTTCACCACCGGGATCGT 719 Query 33806 TTCTATGGCATTAAAGAGATAGtttttttCATTACTATCTTTAACATAAGTATCGATCAA 33865 || || ||||| || | | ||| | | || | || || || || | Sbjct 720 CTCAATCGCATTGAACAAAAAGTCGCGCTGCTCCGGCTCGCGGATGTACGTGTCAATGAG 779 Query 33866 AAGACTATACATTTCCGAATGAATGTTTTCAATGGCCATCTGAAATCCGTAGAAACATCT 33925 || || | ||||| || ||||| ||||| ||||| || ||||| || || | Sbjct 780 CAGCGAGTAGGTCTCCGAGTGGATGTTCTCAATCATGATCTGGAAACCGTAAAAGCAGCG 839 Query 33926 AGCCTCGGTAATCTGCACTTCTGTACAAAATCGTTCTGCTAAA--TTTTCATTCACTATT 33983 ||||||| |||||| || | | ||| ||||| | ||| || || || || || Sbjct 840 CGCCTCGGCGGCCTGCACCTCGGAGCTAAAGCGTTC--CAAAAGGTTCTCGTTGACAATC 897 Query 33984 CCATCACTGGCTGCAAAAAACGCCAATACATGTTTTATAAAATATTTTTCGTCTGGTGTT 34043 || || || ||||| ||||| | || || | ||||| | |||| || ||| Sbjct 898 CCGTCCGATGCCGCAAAGAACGCAAGGACGTGGCTAATAAAGTGGCGCTCGT-TGTCGTT 956 Query 34044 ----AGTTTATTCCAATCATTGATATCTTTAGATATATCCACTTCTTCCACTGTCCAAAA 34099 | || | ||| || | | || || || | || | || || | ||||| || Sbjct 957 CAGGCGGTTGTCCCAGTCGTGCAGGTCCTTGGACAGGTCAATCTCCTCGGCGGTCCAGAA 1016 Query 34100 TGATGCCTCTGCCTTTTTATACATATTCCAGATGTCATGATATTGGATTGGGAAA 34154 || ||||| ||||| || ||||| | ||| || || || || ||| ||||||| Sbjct 1017 CGACGCCTCGGCCTTCTTGTACATTTGCCAAATCTCGTGGTAGCGGA-TGGGAAA 1070 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 629790360388800