Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Malassezia_20furfur_20[genbank_20GCA_5F001265055.1_202015-08-11] 3,460 sequences; 13,865,456 total letters Query= NC_003401.1 Length=133719 Score E Sequences producing significant alignments: (Bits) Value seq3022 102 7e-17 seq3014 82.4 7e-11 >seq3022 Length=6119 Score = 102 bits (112), Expect = 7e-17 Identities = 258/390 (66%), Gaps = 2/390 (1%) Strand=Plus/Minus Query 21117 AACTGACACAAAACGTGACAAGGAGGGAGAGCCATCCGCGCGAGGTCCGCGGGGTTCCAC 21176 || || ||||| | ||||| || || | ||||| ||| ||||| | |||||||| Sbjct 1619 AATTGGCACAAGATATGACAGGGTGGCAATGCCATGAGCGGTAGGTCAGGCGGGTTCCAT 1560 Query 21177 GCGCACATAACGATGCGCCGATC-GTGGGGCCGCCTGTTAATTAGATCCACCACGTAACG 21235 ||| | | || ||||| || || |||||| | | || ||| ||| | || | Sbjct 1559 GCGGAGAGCACAATGCGGCGGTCAGTGGGGTT-CGTCTTGATTTGATGAATGACCTGTGC 1501 Query 21236 CAGCTGGTCCACCCCCTGACCCTCGTAGTTGGCGTCGGCCCCCCTGTACTCCGCCCCAAA 21295 ||||||||| || ||||| ||| |||| || |||||| | ||||| || ||||| Sbjct 1500 CAGCTGGTCTACACCCTGCCCCGTATAGTCGGTGTCGGCGTCGACGTACTGGGCGCCAAA 1441 Query 21296 ATGTCTCCACTGGAACCCGTACACCGGCCCCAGATCGCCCTCGCGGCGGTCCCCGAAGCC 21355 || | ||| ||||| ||||||||||| |||| |||||| || |||| |||| || Sbjct 1440 GTGCCGCCATTGGAAGCCGTACACCGGTCCCAAGTCGCCCGGACGACGGTGTCCGAGTCC 1381 Query 21356 CTGCGCCGCCAAAAAGGCGCGGGACCCGTGCGCGTCCCAAATTTTTACGCCGCGGCGCGA 21415 | ||| | || || ||| || | | ||||| || | ||| ||| || Sbjct 1380 GCGACTCGCGAGGAATTCGGCGGAGCCATTGCCATCCCAGATGTGCACGTTGCGCTCCGC 1321 Query 21416 CAGTTCGGTGGAGTCGGTGGAGCCCCTGATAAACCACAGCAACTCCTCCACGACGCCCCT 21475 ||| | ||| || ||| |||| |||||||| || | ||| || | ||||| | Sbjct 1320 CAGCCAGTTGGCATCCGTGTTGCCCGAAATAAACCAGAGAAGCTCTTCGAGTACGCCACG 1261 Query 21476 CCAAAACACCCTTTTGGTGGTTAACAGAGG 21505 | || || | ||||||||| | ||| || Sbjct 1260 GAAGAAAACGCGTTTGGTGGTGAGCAGCGG 1231 >seq3014 Length=6189 Score = 82.4 bits (90), Expect = 7e-11 Identities = 133/189 (70%), Gaps = 2/189 (1%) Strand=Plus/Plus Query 20912 CAGCTGAAGCAGCAGGGGATCAACGTGGTTGTTGTAAACGTGGGCGTCACCCAAGGTGTG 20971 |||||| || |||| || || | |||| | ||| ||||| |||||||||| || | Sbjct 4329 CAGCTGCTGCTGCAGCGGCTCGATATGGTCGAGGTACACGTGAGCGTCACCCATGGCCAG 4388 Query 20972 CACAAAGTCTCCCGGGGTCAGG-CCCGTGACGTGAGCGATCAGATACGTCAGGAGGGCGT 21030 | || || ||| ||| ||||||||||| || || || | || || || |||| Sbjct 4389 CGTGAATTCGGCCGCC-TCACATCCCGTGACGTGCGCAATGAGGTGGGTGAGTAGCGCGT 4447 Query 21031 AGCTGGCGATGTTAAACGGGACCCCGAGGCCCATGTCGGCGGACCTCTGGTACAGCTGGC 21090 |||| || ||||| || || || || | ||||| ||| || | |||||||| ||||| Sbjct 4448 AGCTCGCAATGTTGAAGGGCACGCCCAAGCCCAGATCGCACGAGCGCTGGTACATCTGGC 4507 Query 21091 AGGACAGCT 21099 | || |||| Sbjct 4508 ACGAGAGCT 4516 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 427757961220800