Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Malassezia_20furfur_20[genbank_20GCA_5F001265055.1_202015-08-11] 3,460 sequences; 13,865,456 total letters Query= NC_003529.1 Length=155060 Score E Sequences producing significant alignments: (Bits) Value seq3271 116 4e-21 seq884 107 2e-18 >seq3271 Length=3785 Score = 116 bits (128), Expect = 4e-21 Identities = 150/207 (72%), Gaps = 0/207 (0%) Strand=Plus/Minus Query 52837 GAGGCCGTCGACATTGAAAAAGAGTTTTTTACGGACGCTTTACCCGTATCATTGTTGGGC 52896 ||||| || | ||||| |||| || || | ||||| | ||||| || || | ||| Sbjct 431 GAGGCGGTGGCGATTGAGCAAGACTTCCTTTCCGACGCGCTGCCCGTGTCGCTGATTGGC 372 Query 52897 ATGAACGCGACCATGATGTGCGAGTACATCGAGTTTGTTGCGGACAGACTGTTGATGCAG 52956 ||||| ||| | |||||||| ||||||| |||||||| |||||| | ||| | || | Sbjct 371 ATGAATGCGCGCCTGATGTGCCAGTACATTGAGTTTGTGGCGGACCGCCTGCTCGTGGCG 312 Query 52957 CTCGGTCAGCCGAAATACTATAATGCGCGTAACCCCTTTTCGTTTATGAACAACATATCG 53016 || || | ||||| |||| || ||| |||||||| |||||| | || || ||| Sbjct 311 CTGGGCAACCCGAAGCACTACAACGCGACGAACCCCTTCGACTTTATGGAGAATATTTCG 252 Query 53017 CTCGAGGGCAAAACAAACTTTTTCGAG 53043 || ||||||| | |||||||||||| Sbjct 251 CTGCAGGGCAAGTCGAACTTTTTCGAG 225 >seq884 Length=2618 Score = 107 bits (118), Expect = 2e-18 Identities = 104/134 (78%), Gaps = 0/134 (0%) Strand=Plus/Plus Query 139538 CCGCCTCGTAAACGCAAAACTAAGTGAATCGTAGACTCTTTTTGAATGTTATAATCGCTC 139597 ||||| || | |||||||| | ||| | ||||||||| || || ||||| || |||||| Sbjct 2288 CCGCCGCGCAGGCGCAAAACGAGGTGCAGCGTAGACTCCTTCTGGATGTTGTAGTCGCTC 2347 Query 139598 ATTGTGCTCGAGTCTTCGAGCTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGT 139657 | |||| | ||| |||||||| || || ||| |||| || || ||||||||||| || Sbjct 2348 AGCGTGCGCCCGTCCTCGAGCTGCTTGCCGGCAAAGATGAGGCGCTGCTGATCGGGCGGA 2407 Query 139658 ATGCCTTCTTTGTC 139671 ||||| || ||||| Sbjct 2408 ATGCCCTCCTTGTC 2421 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 496042545232000