Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Malassezia_20furfur_20[genbank_20GCA_5F001265055.1_202015-08-11] 3,460 sequences; 13,865,456 total letters Query= NC_003663.2 Length=224499 Score E Sequences producing significant alignments: (Bits) Value seq3271 123 4e-23 >seq3271 Length=3785 Score = 123 bits (136), Expect = 4e-23 Identities = 387/592 (65%), Gaps = 13/592 (2%) Strand=Plus/Plus Query 49950 AAACATCAAACATGCGAAATCGCAGTGCAGACCCTCGTCTCTACTAATTAGTTCGTTGGA 50009 ||||| || || || || ||| ||||||||||||||| | || || ||||| || Sbjct 483 AAACAGCAGGCACGCAAAGTCGGTGTGCAGACCCTCGTCACGCGAGATGAGCTCGTTCGA 542 Query 50010 AAACGTGAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGACGCAAATGACCC 50069 |||| || |||||||| || || ||||| || ||||| || || || ||||| || || Sbjct 543 GAACGACAGGCCGGGCATCAGACCGCGCTTCTTCAGCCAGAAGATCGAGGCAAACGAGCC 602 Query 50070 AGAAAAGAAGATTCCTTCTACTGCGGCAAAGGCAACAAGTCTCTCTCCATAAC-TGGC-- 50126 || |||||||| || || || |||||||| || ||||| | ||| | | ||| || Sbjct 603 CGAGAAGAAGATGCCCTCCACGGCGGCAAACGCCACAAGGCGCTC-CGAGAACGACGCAC 661 Query 50127 -GCTGTCATGTATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATCGTTT 50185 || ||| ||||| | ||||| |||||||||| || || || ||||| | Sbjct 662 GGCGGTCGCTGATCCAGCGCAGCGCCCACTCGGCCTTCTGCTTCACCACCGGGATCGTCT 721 Query 50186 CTATGGCATTAAAGAGATAGtttttttCATTACTATCTTTAACATAAGTATCGATCAAAA 50245 | || ||||| || | | ||| | | || | || || || || | | Sbjct 722 CAATCGCATTGAACAAAAAGTCGCGCTGCTCCGGCTCGCGGATGTACGTGTCAATGAGCA 781 Query 50246 GACTATACATTTCCGAATGAATGTTTTCAATGGCCATCTGAAATCCGTAGAAACATCTAG 50305 | || | ||||| || ||||| ||||| ||||| || ||||| || || | | Sbjct 782 GCGAGTAGGTCTCCGAGTGGATGTTCTCAATCATGATCTGGAAACCGTAAAAGCAGCGCG 841 Query 50306 CCTCGGTAATCTGCACTTCTGTACAAAATCGTTCAGCTAAA--TTTTCATTCACTATTCC 50363 |||||| |||||| || | | ||| ||||| | ||| || || || || || || Sbjct 842 CCTCGGCGGCCTGCACCTCGGAGCTAAAGCGTTC--CAAAAGGTTCTCGTTGACAATCCC 899 Query 50364 GTCACTGGCTGCAAAAAACGCCAATACATGTTTTATAAAATGTTTTTCGTTGGGTGTTA- 50422 ||| || ||||| ||||| | || || | ||||| || |||||| | | Sbjct 900 GTCCGATGCCGCAAAGAACGCAAGGACGTGGCTAATAAAGTGGCGCTCGTTGTCGTTCAG 959 Query 50423 --GTTTATTCCAATCATTGATATCTTTAGATATATCTACTTCTTCCACTGTCCAAAATGA 50480 | || | ||| || | | || || || | || | || || | ||||| || || Sbjct 960 GCGGTTGTCCCAGTCGTGCAGGTCCTTGGACAGGTCAATCTCCTCGGCGGTCCAGAACGA 1019 Query 50481 TGCCTCTGCCTTTTTATACATATTCCAGATGTCATGATATTGGATTGGGAAA 50532 ||||| ||||| || ||||| | ||| || || || || ||| ||||||| Sbjct 1020 CGCCTCGGCCTTCTTGTACATTTGCCAAATCTCGTGGTAGCGGA-TGGGAAA 1070 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 718237734874400