Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Malassezia_20furfur_20[genbank_20GCA_5F001265055.1_202015-08-11] 3,460 sequences; 13,865,456 total letters Query= NC_007383.1 Length=134394 Score E Sequences producing significant alignments: (Bits) Value seq1050 120 3e-22 seq3271 87.8 2e-12 >seq1050 Length=2041 Score = 120 bits (132), Expect = 3e-22 Identities = 155/213 (73%), Gaps = 1/213 (0%) Strand=Plus/Minus Query 23982 CCAAACAAA-ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGT 24040 ||||||| | ||||| || || ||||| || | || ||||| |||| || ||||||| Sbjct 318 CCAAACACACATGCAGGTTTTCGTAAAGACTCTGACAGGAAAGACGATCACACTCGAAGT 259 Query 24041 CGAGGCCAACGACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACC 24100 |||| | |||||| |||||| | ||||| |||||| ||||| || ||||| || Sbjct 258 CGAGTCGTCCGACACGATCGAGAACGTCAAGGCAAAGATCCAAGACAAGGAGGGCATTCC 199 Query 24101 TCCCGATCAACAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATGACAGAAACGTCAG 24160 ||| || |||||| | ||||| | | |||||||| ||||| |||| | | | | | || Sbjct 198 TCCGGACCAACAGCGTCTGATCTTTGCGGGCAAGCAGCTCGAGGATGGCCGTACCCTGAG 139 Query 24161 CGATTATAACATTCAAAAAGAATCTACAATTCA 24193 ||| || ||||| || || || || || |||| Sbjct 138 CGACTACAACATCCAGAAGGAGTCGACGCTTCA 106 >seq3271 Length=3785 Score = 87.8 bits (96), Expect = 2e-12 Identities = 143/206 (69%), Gaps = 0/206 (0%) Strand=Plus/Plus Query 104611 TCaaaaaaaTTAGTCTTGCCCTCCAGAGAAATATTATTCATAAATTCGAAAGGATTCAAA 104670 || ||||| || | |||||||| ||| |||||||| | |||||| ||||| || ||| Sbjct 226 TCGAAAAAGTTCGACTTGCCCTGCAGCGAAATATTCTCCATAAAGTCGAAGGGGTTCGTC 285 Query 104671 GTCTTAAAATATTTTTCGTAGCCAAGCTCGATCAACAGTCGATCCGCCACAAATTCGATG 104730 | || | | || || ||| ||| | | | ||| || ||||||||||| || ||| Sbjct 286 GCGTTGTAGTGCTTCGGGTTGCCCAGCGCCACGAGCAGGCGGTCCGCCACAAACTCAATG 345 Query 104731 TACTCGCACATAGAATGTGCATTCATGCCCAGCATTGCGACGGGTAAAGCGTTAGTaaaa 104790 |||| |||||| | ||||||||||| | || | ||||| | |||| | || Sbjct 346 TACTGGCACATCAGGCGCGCATTCATGCCAATCAGCGACACGGGCAGCGCGTCGGAAAGG 405 Query 104791 aaaTCTTTCTCGATGTCCACGGCTTC 104816 || |||| ||| || |||| || || Sbjct 406 AAGTCTTGCTCAATCGCCACCGCCTC 431 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 429917870136300