Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Malassezia_20furfur_20[genbank_20GCA_5F001265055.1_202015-08-11] 3,460 sequences; 13,865,456 total letters Query= NC_008187.1 Length=191100 Score E Sequences producing significant alignments: (Bits) Value seq2953 100 3e-16 seq2796 91.5 2e-13 seq878 89.7 6e-13 >seq2953 Length=7094 Score = 100 bits (110), Expect = 3e-16 Identities = 147/203 (72%), Gaps = 4/203 (2%) Strand=Plus/Plus Query 126180 GGTGTAAATGTAGCGGGGAGCTGCCGAATCCTTGCCTCCCTCCAACCGCGTGCCAAACTG 126239 |||| | ||||| || | | |||| |||||||| ||| | ||||| || ||||| Sbjct 1450 GGTGAAGATGTAACGCGCACTGGCCGCGTCCTTGCCGCCCATGGAGCGCGTACCGAACTG 1509 Query 126240 ACCGTCCGGCTCCAACAACTGCACATTGTTGGCTCCCACA-AAGTCCTGCGCAAACTTGA 126298 |||| ||| | || | || |||||| ||||| || ||||||||||||| || Sbjct 1510 GCCGTTGGGCATGAGCATGTTGACGTTGTTG-CTCCCGCAGAAGTCCTGCGCAAGGCCGA 1568 Query 126299 CAATGGTC-TCGCACAGGTTCTGCTCGCCGTGCTTGTAGTCGGTCTGCTCGGCCACGTAG 126357 | |||||| || | |||| |||| |||||||| | ||| |||| ||||| || |||||| Sbjct 1569 CGATGGTCATCAC-CAGGCTCTGGTCGCCGTGGTGATAGGCGGTGTGCTCCGCGACGTAG 1627 Query 126358 CCGCTCAGCTGCGCAACCTTGAT 126380 || ||||||| |||||||| Sbjct 1628 CCCTGCAGCTGCTGCACCTTGAT 1650 >seq2796 Length=74167 Score = 91.5 bits (100), Expect = 2e-13 Identities = 104/140 (74%), Gaps = 0/140 (0%) Strand=Plus/Minus Query 15059 GGCGACAAGTTTTGCTCTGGTATGGCGCAAAAGGGCACGTGCGGCATGATTTTCCCCCAG 15118 |||||||||||| || || | ||||||||| ||| |||||| | | || ||| Sbjct 42626 GGCGACAAGTTTGCGTCGCGTCACGGGCAAAAGGGTACGGTCGGCATCACCTACCGCCAA 42567 Query 15119 GAAGACATGCCCTTTACCGCGTCAGGCATGACGCCCGACATTATCATCAACCCCAACTGC 15178 || || ||||||| ||||| ||||| ||||||||||| ||||||||||| || | Sbjct 42566 GAGGATTTGCCCTTCACCGCCGAGGGCATCACGCCCGACATCATCATCAACCCGCACGCC 42507 Query 15179 ATCCCGTCCCGCATGACCAT 15198 |||||| || |||||||| Sbjct 42506 ATCCCGAGTCGTATGACCAT 42487 >seq878 Length=91336 Score = 89.7 bits (98), Expect = 6e-13 Identities = 169/249 (68%), Gaps = 0/249 (0%) Strand=Plus/Minus Query 15407 GGACCGACGTACTATCACCGACTCAAACACATGGTAAAGGACAAGATGCACGCGCGATCG 15466 || |||| ||||| || |||||| |||||||| | ||||||||||||||| || || Sbjct 16218 GGCCCGATTTACTACCAGAAACTCAAGCACATGGTCATGGACAAGATGCACGCCCGCGCG 16159 Query 15467 CACGGACAGGTGACGACGCTCCATCGCCAGCCCAACTGCGGTCGATCGCAAGGCGGTGGC 15526 | || | | || |||| |||||||| | | || || |||| | ||||||| Sbjct 16158 CGGGGGCCGCGCGCGGTGCTCACGCGCCAGCCGACCGAGGGGCGCTCGCGCGACGGTGGC 16099 Query 15527 CTCCGCTTTGGAGAGATGGAAAAGGACTGCATTCTGGTGCACGGCGCCACCCAATTCCTC 15586 || || | || |||||||| |||||| | | | | |||||||||| || | ||| Sbjct 16098 CTGCGTCTCGGCGAGATGGAGCGCGACTGCCTGATCGGGTACGGCGCCACGCAGCTTCTC 16039 Query 15587 AACGAGCGCATGTTTCTCAACAGTGACCCGTTCCAGATTGACGTGTGCAAAGACTGCGGC 15646 ||||||| | | ||| | ||| |||| | | |||||||| | | |||||| Sbjct 16038 CTCGAGCGCCTCATGATCAGCTCGGACGCGTTTGTGGTGAACGTGTGCGAGCAGTGCGGC 15979 Query 15647 ATGATGAGC 15655 || | ||| Sbjct 15978 CTGCTCAGC 15970 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 611365557296000