Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Malassezia_20furfur_20[genbank_20GCA_5F001265055.1_202015-08-11] 3,460 sequences; 13,865,456 total letters Query= NC_008293.1 Length=135454 Score E Sequences producing significant alignments: (Bits) Value seq1050 123 2e-23 seq3452 87.8 2e-12 >seq1050 Length=2041 Score = 123 bits (136), Expect = 2e-23 Identities = 149/203 (73%), Gaps = 0/203 (0%) Strand=Plus/Minus Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058 ||||| | || ||||||||| |||| || || | |||||| ||||||| |||||||| Sbjct 308 ATGCAGGTTTTCGTAAAGACTCTGACAGGAAAGACGATCACACTCGAAGTCGAGTCGTCC 249 Query 25059 GACACTATCGAGTCACTGAAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGACCAA 25118 ||||| |||||| | ||| ||| ||| ||||| || || ||||| || |||||| Sbjct 248 GACACGATCGAGAACGTCAAGGCAAAGATCCAAGACAAGGAGGGCATTCCTCCGGACCAA 189 Query 25119 CAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACAAT 25178 ||||| | || ||||| ||||| || | || |||| || || || |||| ||||| Sbjct 188 CAGCGTCTGATCTTTGCGGGCAAGCAGCTCGAGGATGGCCGTACCCTGAGCGACTACAAC 129 Query 25179 ATTCAAAAAGAATCCACGCTACA 25201 || || || || || ||||| || Sbjct 128 ATCCAGAAGGAGTCGACGCTTCA 106 >seq3452 Length=2631 Score = 87.8 bits (96), Expect = 2e-12 Identities = 127/177 (72%), Gaps = 2/177 (1%) Strand=Plus/Plus Query 25035 ATCACAGTCGAAGTGGAGTCGTCTGACACTATCGAGTCACTGAA-GCAAAAAATCACTGA 25093 || ||| | |||||||| ||||||||||| || || |||| || || | ||| || Sbjct 18 ATTACATTGGAAGTGGAATCGTCTGACACCATTGAAAACGTGAAGGCGAAGATTCA-AGA 76 Query 25094 CAAAGAAGGGATTCCACCTGACCAACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGA 25153 || || || ||||| || ||||||||||| | || ||||| ||||| || | || || Sbjct 77 TAAGGAGGGCATTCCTCCGGACCAACAGCGTCTGATCTTTGCGGGCAAGCAGCTTGAGGA 136 Query 25154 TGATCGCACTGTGGGCGATTACAATATTCAAAAAGAATCCACGCTACATTTAGTGCT 25210 || || || || |||| ||||| || || || || || ||||| || || || || Sbjct 137 TGGCCGTACCCTGAGCGACTACAACATCCAGAAGGAGTCGACGCTTCACTTGGTCCT 193 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 433309727099900