Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Malassezia_20furfur_20[genbank_20GCA_5F001265055.1_202015-08-11] 3,460 sequences; 13,865,456 total letters Query= NC_009011.2 Length=131331 Score E Sequences producing significant alignments: (Bits) Value seq1050 125 6e-24 seq3452 120 3e-22 seq1790 104 2e-17 >seq1050 Length=2041 Score = 125 bits (138), Expect = 6e-24 Identities = 147/199 (74%), Gaps = 0/199 (0%) Strand=Plus/Plus Query 114185 CGTAGATTCTTTTTGAATGTTGTAATCGCTCATAGTACGAGAATCTTCAAGTTGTTTACC 114244 ||| || || || || |||||||| ||||||| ||||| ||| || || || || || Sbjct 111 CGTCGACTCCTTCTGGATGTTGTAGTCGCTCAGGGTACGGCCATCCTCGAGCTGCTTGCC 170 Query 114245 AGCGTAGATGAGACGCTGTTGGTCCGGAGGAATGCCTTCTTTGTCGGCAATCTTTTGTTT 114304 || |||| |||||||||||||||||||||||||| || ||||| |||||| || Sbjct 171 CGCAAAGATCAGACGCTGTTGGTCCGGAGGAATGCCCTCCTTGTCTTGGATCTTTGCCTT 230 Query 114305 TAGCTGTTCAACGGTGTCGGTGGATTCGACGTCCACGGTCACCGTTTTGCCGGTCAGAGT 114364 | | || | ||||||| || ||||| || | || | ||| || || |||||||| Sbjct 231 GACGTTCTCGATCGTGTCGGACGACTCGACTTCGAGTGTGATCGTCTTTCCTGTCAGAGT 290 Query 114365 TTTTACAAAAATCTGCATG 114383 ||||| |||| ||||||| Sbjct 291 CTTTACGAAAACCTGCATG 309 >seq3452 Length=2631 Score = 120 bits (132), Expect = 3e-22 Identities = 152/209 (73%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 114153 ATACCGCCACGTAGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCG 114212 ||||| ||||| || | | || || || | ||| || || || || |||||||| ||| Sbjct 211 ATACCACCACGAAGACGGAGGACCAAGTGAAGCGTCGACTCCTTCTGGATGTTGTAGTCG 152 Query 114213 CTCATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGA 114272 |||| ||||| ||| ||||| || || || || |||| |||||||||||||||||| Sbjct 151 CTCAGGGTACGGCCATCCTCAAGCTGCTTGCCCGCAAAGATCAGACGCTGTTGGTCCGGA 92 Query 114273 GGAATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTCG 114332 |||||||| || || || |||||| || | | ||||| |||||| | ||||| Sbjct 91 GGAATGCCCTCCTTATCTTGAATCTTCGCCTTCACGTTTTCAATGGTGTCAGACGATTCC 32 Query 114333 ACGTCCACGGTCACCGTTTTGCCGGTCAG 114361 || |||| || | ||| ||||| || || Sbjct 31 ACTTCCAATGTAATCGTCTTGCCCGTAAG 3 Score = 98.7 bits (108), Expect = 8e-16 Identities = 90/114 (79%), Gaps = 0/114 (0%) Strand=Plus/Minus Query 114185 CGTAGATTCTTTTTGAATGTTGTAATCGCTCATAGTACGAGAATCTTCAAGTTGTTTACC 114244 ||| || || || || |||||||| ||||||| |||||| ||||| ||||| ||||| Sbjct 407 CGTCGACTCCTTCTGGATGTTGTAGTCGCTCAGAGTACGCCCGTCTTCCAGTTGCTTACC 348 Query 114245 AGCGTAGATGAGACGCTGTTGGTCCGGAGGAATGCCTTCTTTGTCGGCAATCTT 114298 ||| |||| || ||||||||||| |||||||| || || ||||| |||||| Sbjct 347 GGCGAAGATCAGGCGCTGTTGGTCTGGAGGAATACCCTCCTTGTCCTGAATCTT 294 >seq1790 Length=18119 Score = 104 bits (114), Expect = 2e-17 Identities = 110/145 (76%), Gaps = 0/145 (0%) Strand=Plus/Minus Query 114154 TACCGCCACGTAGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCGC 114213 |||| ||||| || | | || | || | ||| || || || ||||||||||| |||| Sbjct 160 TACCACCACGCAGACGGAGGACGAGGTGAAGCGTCGACTCCTTCTGAATGTTGTAGTCGC 101 Query 114214 TCATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGAG 114273 ||| ||||| ||| ||||| || |||||||| |||| || |||||||||||||| | Sbjct 100 TCAGCGTACGGCCATCCTCAAGCTGCTTACCAGCAAAGATCAGGCGCTGTTGGTCCGGGG 41 Query 114274 GAATGCCTTCTTTGTCGGCAATCTT 114298 ||||||| || ||||| |||||| Sbjct 40 GAATGCCCTCCTTGTCCTGAATCTT 16 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 420116683457520