Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Malassezia_20furfur_20[genbank_20GCA_5F001265055.1_202015-08-11] 3,460 sequences; 13,865,456 total letters Query= NC_009898.1 Length=368683 Score E Sequences producing significant alignments: (Bits) Value seq1050 134 3e-26 seq3388 111 4e-19 seq2953 111 4e-19 seq3452 87.8 4e-12 >seq1050 Length=2041 Score = 134 bits (148), Expect = 3e-26 Identities = 166/227 (73%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306 ||||||||||| | || ||||| |||| ||| || || ||||| || |||||| Sbjct 82 CCACCGCGGAGGCGGAGGACGAGGTGAAGCGTCGACTCCTTCTGGATGTTGTAGTCGCTC 141 Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366 || || || || || || | || || || || ||||||||||||||||| || Sbjct 142 AGGGTACGGCCATCCTCGAGCTGCTTGCCCGCAAAGATCAGACGCTGTTGGTCCGGAGGA 201 Query 288367 ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCTACT 288426 || || || || || ||||| || || || ||||| || || | ||| ||| || ||| Sbjct 202 ATGCCCTCCTTGTCTTGGATCTTTGCCTTGACGTTCTCGATCGTGTCGGACGACTCGACT 261 Query 288427 TCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 ||||| ||||||||||| || ||||||||||| ||||| | |||||| Sbjct 262 TCGAGTGTGATCGTCTTTCCTGTCAGAGTCTTTACGAAAACCTGCAT 308 >seq3388 Length=2974 Score = 111 bits (122), Expect = 4e-19 Identities = 139/191 (73%), Gaps = 0/191 (0%) Strand=Plus/Plus Query 288283 TCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAG 288342 || || ||||| || |||||| ||||||||| ||||| || | || || || || ||| Sbjct 525 TCCTTCTGGATGTTGTAGTCGCTGAGCGTGCGGCCGTCCTCGAGCTGCTTGCCCGCAAAG 584 Query 288343 ATCAGACGCTGTTGAGAATCTGGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTT 288402 || || ||||| || ||||| || || || ||||||| || | || ||| Sbjct 585 ATGAGCCGCTGCTGGTCCGGGGGGATACCCTCCTTGTCCTGGACCTTGGACTTGACGACG 644 Query 288403 TCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACG 288462 || || | |||||||| || || ||||||||||||||||| || || || ||||||| | Sbjct 645 TCGATCGTGTCGCTCGACTCGACCTCGAGCGTGATCGTCTTGCCCGTGAGCGTCTTGATG 704 Query 288463 AATATCTGCAT 288473 || || ||||| Sbjct 705 AAGATTTGCAT 715 >seq2953 Length=7094 Score = 111 bits (122), Expect = 4e-19 Identities = 307/452 (68%), Gaps = 18/452 (4%) Strand=Plus/Plus Query 325322 ATATATCGTGCACTCGCGTGATCCTTACCACCCTGCAATCTCGAACCGAACTGGCCCTCC 325381 || || || ||||| || ||||| || ||| | | || |||||||||||| | Sbjct 1457 ATGTAACGCGCACTGGCCGCGTCCTTGCCGCCCATGGAGCGCGTACCGAACTGGCCGTTG 1516 Query 325382 GGCAACAACCAGTTGATGTTATTGCTTCCGACATAA-TCCTGTGCAAGGTTCACGATGGT 325440 |||| | | ||||| ||| ||||| ||| || || ||||| |||||| |||||||| Sbjct 1517 GGCATGAGCATGTTGACGTTGTTGCTCCCG-CAGAAGTCCTGCGCAAGGCCGACGATGGT 1575 Query 325441 CCCTTGCAGAGATGCT--TCGCCATGGTGATAGGCGCTATGCTCTGCAACGTAACCGCTG 325498 | ||| | | || ||||| |||||||||||| | ||||| || ||||| || ||| Sbjct 1576 CATCACCAG-GCT-CTGGTCGCCGTGGTGATAGGCGGTGTGCTCCGCGACGTAGCC-CTG 1632 Query 325499 -AACTG-TGCAACCTTCACGTCGGTCGTCAAATTGCGCTTGAAAGCTG-AATATATCACT 325555 | ||| ||| ||||| | |||||| | | ||||||||| |||| | | | | ||| Sbjct 1633 CAGCTGCTGC-ACCTTGATTTCGGTCTTGAGGTTGCGCTTG-AAGCAGCCAAACAGCACC 1690 Query 325556 TTCCGTTGAGAAGGTTTGAAACCATCAACGACCGACGGAATGCTTCGTTCCAGATCGTAC 325615 || || || || || || || || || |||||||| ||| || ||| | Sbjct 1691 TTGCGCTGCCCGGGCTTCAAGCCGTCGACCACCGACGGGATGGAGCGGATGTTGTCGGCC 1750 Query 325616 CGCGAGAACAAAATAAGTTCCTTGTCGATGAAGTCGGGAACGGGAACCTCGGGCTTCTTG 325675 |||||| | || || ||||||| ||| ||||||| | ||| | || | | | | Sbjct 1751 ATCGAGAAGAGGATCAGCTCCTTGTTGATAAAGTCGGCGATGGGGATCTGGCGGATGCGG 1810 Query 325676 TGGTCAAGTTGATTTCCTGGTTCGTA-TGCCGTCATCCACTCCTTGCGATCCTCGGC--T 325732 |||||||| | | || || | | || || || |||||||||||| || ||||| | Sbjct 1811 TGGTCAAGGTAGGTGCCGGGCACAAACTGGCG-CAGCCACTCCTTGCGGTCGTCGGCCTT 1869 Query 325733 CGTGACTTGTTGAAAGAACGGTCAATGAGCTC 325764 | | ||||||||| | |||| | ||||| Sbjct 1870 CTT--CTTGTTGAACGCGAGGTCCACAAGCTC 1899 >seq3452 Length=2631 Score = 87.8 bits (96), Expect = 4e-12 Identities = 143/206 (69%), Gaps = 0/206 (0%) Strand=Plus/Minus Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306 ||||| || || | || || | |||| ||| || || ||||| || |||||| Sbjct 208 CCACCACGAAGACGGAGGACCAAGTGAAGCGTCGACTCCTTCTGGATGTTGTAGTCGCTC 149 Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366 || || || || || || | || || || || ||||||||||||||||| || Sbjct 148 AGGGTACGGCCATCCTCAAGCTGCTTGCCCGCAAAGATCAGACGCTGTTGGTCCGGAGGA 89 Query 288367 ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCTACT 288426 || || || ||||| || || ||||| ||||||||||| || | || |||||| ||| Sbjct 88 ATGCCCTCCTTATCTTGAATCTTCGCCTTCACGTTTTCAATGGTGTCAGACGATTCCACT 29 Query 288427 TCGAGCGTGATCGTCTTCCCGGTCAG 288452 || | || |||||||| || || || Sbjct 28 TCCAATGTAATCGTCTTGCCCGTAAG 3 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1179602104445880