Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Malassezia_20furfur_20[genbank_20GCA_5F001265055.1_202015-08-11] 3,460 sequences; 13,865,456 total letters Query= NC_009899.1 Length=344691 Score E Sequences producing significant alignments: (Bits) Value seq1276 141 2e-28 seq2953 116 8e-21 seq1277 107 4e-18 seq3271 93.3 9e-14 >seq1276 Length=1557 Score = 141 bits (156), Expect = 2e-28 Identities = 412/630 (65%), Gaps = 12/630 (2%) Strand=Plus/Minus Query 333725 CTTCACGAACTCGGACAGATTTCCCTTGTACTTCTTCAGCTTTAGGTTAGGTTCGTAATG 333784 |||||||||| | ||| || ||| ||| ||| | ||| | | ||||| | || Sbjct 928 CTTCACGAACGCATCCAGGTTGCCCGGGTAACGCTTGATCTTGAAGC--GGTTCA-AGTG 872 Query 333785 GATAATAGAGGTGCAAACAGCGTCGAGGAACCCGGAGTCGTGTGACACAATCACGCACGA 333844 || ||| ||| || || ||| ||||||| ||||||||| || ||||| | ||| Sbjct 871 GAGAATGTCGGTACACACGTCGTTGAGGAACTTGGAGTCGTGCGAGACAATGATCGACGT 812 Query 333845 AACGTCCTTAAGGTTGATCAGGTATTCAATCAGCCACCTCACGTTAGACACAGAAAGATG 333904 || | || || | ||||| || | | |||| | ||||| |||| | || Sbjct 811 GGTCTCGGTGAGACTGTTGAGGTAGTCCGTGATCCACTTGACGTTGATCACATCCAAGTG 752 Query 333905 GTTGGTCGGCTCGTCAAGAAGTAGTAGCTTTGCGTTCAGGAGCATTGCACGTGCAAGAGC 333964 ||| |||||||||||||| || || | | || || | |||| ||||| || || || Sbjct 751 GTTCGTCGGCTCGTCAAGCAGAAGAATGTCGGCCTTGAACAGCACCGCACGCGCCAGGGC 692 Query 333965 GAGTTTCATTTTCCACCCTCCTGAAAGAGTGTTAATTGGGGCAGATTGGCGCTCAATATC 334024 ||| ||||| ||||| || || || || | |||| || ||| ||||||| ||| Sbjct 691 GAGCTTCATCTTCCAGCCACCCGAGAGCGCCGTAATGGGACCAGCCTGGCGCTGCTCATC 632 Query 334025 AAAGCCAACCGATTCTAGAGTAGTTACGATCTTTTCACGAGACCAAATGTTTTCCTTTAC 334084 ||||| | | | || ||| || |||| | | | || | || | Sbjct 631 GAAGCCCATC--TCCTTGAG------CG-TCTTGGCCGCCGTCTCGTGGTCGACGTTCAG 581 Query 334085 TTGTTCATCATTGGCAATGAAGTCAATGATAGCCATGTTAGAATCGGACCCGTCGAGATC 334144 | | || | | |||||||| || || | |||| | || || |||||||| || Sbjct 580 GCGCTTGTCGGCGACGATGAAGTCGATAATGGAAATGTCACCCTCCGAGCCGTCGAGGTC 521 Query 334145 GTGTTCCACGTAAGCAGTTTTCAAAACATCCGCAGAGGGGAACCCTTCAAGCTGACCGTT 334204 ||| || ||||| || || | || | |||||||| || |||| ||||||||| Sbjct 520 GTGCTCGACGTACCAGGTGCGCACCTCGTCGGGCGAGGGGAAGCCCTCAACCTGACCGTT 461 Query 334205 CACAATAGCGCGCATCAGAGTTGATTTACCCGCCCCGTTTGGCCCACACAGACCGTAGCG 334264 | || ||||||||||| || || ||||||| ||||| | ||||||||||||||||| Sbjct 460 CTGGATGGCGCGCATCAGCGTCGACTTACCCGAACCGTTGCGGCCACACAGACCGTAGCG 401 Query 334265 GTTTCCACGCTTCAGATTGAACCGCGTATTGTTCAGAAGAATTTTTCCACCATATGCCAG 334324 || |||||||| || | | || |||| || ||||| || |||| || || || Sbjct 400 GTGGCCACGCTTGAGGCGCAGCGTCGCCGTGTTGAGCAGAATCTTGGCACCGTAGGCGAG 341 Query 334325 AGAAAATTCACAATCACACAGATCCTCACC 334354 || || | || | ||||| || |||| Sbjct 340 CGAGAACTGGCAGTTGCACAGGTCGACACC 311 >seq2953 Length=7094 Score = 116 bits (128), Expect = 8e-21 Identities = 312/458 (68%), Gaps = 18/458 (4%) Strand=Plus/Plus Query 297437 GTGAAAATATATCGTGCACTCGCGTGATCCTTACCACCCTGCAATCTCGAACCGAACTGG 297496 ||||| || || || ||||| || ||||| || ||| | | || |||||||||| Sbjct 1451 GTGAAGATGTAACGCGCACTGGCCGCGTCCTTGCCGCCCATGGAGCGCGTACCGAACTGG 1510 Query 297497 CCCTCCGGCAACAACCAGTTGATGTTATTGCTTCCGACATAA-TCCTGTGCAAGGTTCAC 297555 || | |||| | | ||||| ||| ||||| ||| || || ||||| |||||| || Sbjct 1511 CCGTTGGGCATGAGCATGTTGACGTTGTTGCTCCCG-CAGAAGTCCTGCGCAAGGCCGAC 1569 Query 297556 GATGGTCCCTTGCAGAGATGCT--TCGCCATGGTGATAGGCGCTATGCTCTGCAACGTAA 297613 ||||||| ||| | | || ||||| |||||||||||| | ||||| || ||||| Sbjct 1570 GATGGTCATCACCAG-GCT-CTGGTCGCCGTGGTGATAGGCGGTGTGCTCCGCGACGTAG 1627 Query 297614 CCGCTG-AACTG-TGCAACCTTCACGTCGGTCGTCAAATTGCGCTTGAAAGCTG-AATAT 297670 || ||| | ||| ||| ||||| | |||||| | | ||||||||| |||| | | | Sbjct 1628 CC-CTGCAGCTGCTGC-ACCTTGATTTCGGTCTTGAGGTTGCGCTTG-AAGCAGCCAAAC 1684 Query 297671 ATCACTTTCCGTTGAGAAGGTTTGAAACCATCAACGACCGACGGAATGCTTCGTTCCAGA 297730 | ||| || || || || || || || || || |||||||| ||| || Sbjct 1685 AGCACCTTGCGCTGCCCGGGCTTCAAGCCGTCGACCACCGACGGGATGGAGCGGATGTTG 1744 Query 297731 TCGTACCGCGAGAACAAAATAAGTTCCTTGTCGATGAAGTCGGGAACGGGAACCTCGGGC 297790 ||| | |||||| | || || ||||||| ||| ||||||| | ||| | || | | Sbjct 1745 TCGGCCATCGAGAAGAGGATCAGCTCCTTGTTGATAAAGTCGGCGATGGGGATCTGGCGG 1804 Query 297791 TTCTTGTGGTCAAGTTGATTTCCTGGTTCGTA-TGCCGTCATCCACTCCTTGCGATCCTC 297849 | ||||||||| | | || || | | || || || |||||||||||| || || Sbjct 1805 ATGCGGTGGTCAAGGTAGGTGCCGGGCACAAACTGGCG-CAGCCACTCCTTGCGGTCGTC 1863 Query 297850 GGC--TCGTGACTTGTTGAAAGAACGGTCAATGAGCTC 297885 ||| || | ||||||||| | |||| | ||||| Sbjct 1864 GGCCTTCTT--CTTGTTGAACGCGAGGTCCACAAGCTC 1899 >seq1277 Length=1557 Score = 107 bits (118), Expect = 4e-18 Identities = 411/640 (64%), Gaps = 13/640 (2%) Strand=Plus/Minus Query 333715 CGGGACGCTTCTTCACGAACTCGGACAGATTTCCCTTGTACTTCTTCAGCTTTAGGTTAG 333774 ||| |||| |||||||||| || ||| || ||| ||| ||| | ||| | | | Sbjct 937 CGGCACGCG-CTTCACGAACGCGTCCAGGTTGCCCGGGTAGCGCTTGATCTTGAAGC--G 881 Query 333775 GTTCGTAATGGATAATAGAGGTGCAAACAGCGTCGAGGAACCCGGAGTCGTGTGACACAA 333834 |||| |||| ||| ||| || || ||| |||||| ||||||||| ||||||| Sbjct 880 GTTCAGG-TGGAGAATGTCGGTACACACGTCGTTCAGGAACTTGGAGTCGTGCGACACAA 822 Query 333835 TCACGCACGAAACGTCCTTAAGGTTGATCAGGTATTCAATCAGCCACCTCACGTTAGACA 333894 | | ||| || | ||| || | ||||| || | | |||| | ||||| | Sbjct 821 TGATCGACGTGGTCTCGGTGAGGCTGTTGAGGTAGTCGGTGATCCACTTGACGTTGATGA 762 Query 333895 CAGAAAGATGGTTGGTCGGCTCGTCAAGAAGTAGTAGCTTTGCGTTCAGGAGCATTGCAC 333954 | | ||||| ||||||||||| || || || | | || || | |||| |||| Sbjct 761 CGTCCAAGTGGTTCGTCGGCTCGTCGAGCAGCAGAATATCGGCCTTGAACAGCACCGCAC 702 Query 333955 GTGCAAGAGCGAGTTTCATTTTCCACCCTCCTGAAAGAGTGTTAATTGGGGCAGATTGGC 334014 | || || ||||| ||||| ||||| || || || || | | || || ||| |||| Sbjct 701 GCGCCAGGGCGAGCTTCATCTTCCAGCCACCCGAGAGCGCCGTGATCGGACCAGCCTGGC 642 Query 334015 GCTCAATATCAAAGCCAACCGATTCTAGAGTAGTTACGATCTTTTCACGAGACCAAATGT 334074 ||| || ||||| | | | || ||| || |||| | | | || Sbjct 641 GCTGCTCGTCGAAGCCCATC--TCCTTGAG------CG-TCTTGGCCGCCGTCTCGTGGT 591 Query 334075 TTTCCTTTACTTGTTCATCATTGGCAATGAAGTCAATGATAGCCATGTTAGAATCGGACC 334134 | || | | | || | | |||||||| | || | |||| | || || | Sbjct 590 CGACGTTCAGGCGCTTGTCGGCGACGATGAAGTCGAGAATGGAGATGTCACCCTCCGAGC 531 Query 334135 CGTCGAGATCGTGTTCCACGTAAGCAGTTTTCAAAACATCCGCAGAGGGGAACCCTTCAA 334194 ||||||| ||||| || ||||| || || | || | |||||||| || || | Sbjct 530 CGTCGAGGTCGTGCTCGACGTACCAGGTACGCACCTCGTCGGGCGAGGGGAAGCCCTCGA 471 Query 334195 GCTGACCGTTCACAATAGCGCGCATCAGAGTTGATTTACCCGCCCCGTTTGGCCCACACA 334254 ||| |||||| || |||||||||| || || || |||| ||||| | ||||||| Sbjct 470 CCTGGCCGTTCTGGATGGCGCGCATCAACGTCGACTTGCCCGAACCGTTGCGGCCACACA 411 Query 334255 GACCGTAGCGGTTTCCACGCTTCAGATTGAACCGCGTATTGTTCAGAAGAATTTTTCCAC 334314 |||||||||||| |||||||| || | | || |||| || ||||| || ||| Sbjct 410 GACCGTAGCGGTGGCCACGCTTGAGGCGCAGCGTCGCCGTGTTGAGCAGAATCTTGGCAC 351 Query 334315 CATATGCCAGAGAAAATTCACAATCACACAGATCCTCACC 334354 | || || || || || | ||| | ||||| || |||| Sbjct 350 CGTAGGCGAGCGAGAACTGACAGTTGCACAGGTCGACACC 311 >seq3271 Length=3785 Score = 93.3 bits (102), Expect = 9e-14 Identities = 248/368 (67%), Gaps = 12/368 (3%) Strand=Plus/Minus Query 243355 ATCTTTTGGCTGCGGAACAAAGGTGTGATGCCTGGCCTCGGTCTGTCT--AACGAGTTCA 243412 ||||| |||||| ||| ||| ||||||| ||||| ||| ||| |||||| ||| Sbjct 587 ATCTTCTGGCTGAAGAAGCGCGGTCTGATGCCCGGCCT--GTCGTTCTCGAACGAGCTCA 530 Query 243413 TCAGTCGCGACGAGGGCCTTCACCAACAGTTCG-GTGAGCTTATGTATTCAAAGCTCCAG 243471 || || |||||||| || ||| | || | ||| || ||| | | ||| || Sbjct 529 TCTCGCGTGACGAGGGTCTGCACACCGACTTTGCGTGC-CTGCTGTTTGGCCACCTCAAG 471 Query 243472 AA-CAAGCT-ACCATTCGAAACGGTCAAACAAATCATCACAGAAGCAGTTGAAAACGAAA 243529 || | || ||| ||| ||||| || | ||||| || || || || | | || Sbjct 470 AAGCGCGCGCACCC--CGACACGGTGAACCGCATCATTACCGAGGCGGTGGCGATTGAGC 413 Query 243530 AGGAATTCATTTGCGACGCTATTCCA-TGCCGGCTTATTGGCATGAACTCTGAACTCATG 243588 | || ||| ||| |||||| | || || || || ||||||||||| | || ||| Sbjct 412 AAGACTTCCTTTCCGACGCGCTGCCCGTGTCG-CTGATTGGCATGAATGCGCGCCTGATG 354 Query 243589 GGACAGTACATCGAATTCGTAGCCGACCGCATTTTCATCGCGCTTGGTTATGAGAAAGTG 243648 | |||||||| || || || || |||||| | || | ||||| || | ||| Sbjct 353 TGCCAGTACATTGAGTTTGTGGCGGACCGCCTGCTCGTGGCGCTGGGCAACCCGAAGCAC 294 Query 243649 TACAACTCCAAGAACCCCTTTGCCTTTATGGAGCTCATTTCGCTTCAAGGGAAAACTAAC 243708 |||||| | | ||||||||| | |||||||||| |||||||| || || || | ||| Sbjct 293 TACAACGCGACGAACCCCTTCGACTTTATGGAGAATATTTCGCTGCAGGGCAAGTCGAAC 234 Query 243709 TTCTTCGA 243716 || ||||| Sbjct 233 TTTTTCGA 226 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1102831107951000