Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Malassezia_20furfur_20[genbank_20GCA_5F001265055.1_202015-08-11] 3,460 sequences; 13,865,456 total letters Query= NC_013772.1 Length=176677 Score E Sequences producing significant alignments: (Bits) Value seq3388 140 4e-28 seq884 120 3e-22 seq1050 104 3e-17 seq975 102 9e-17 seq1153 86.0 7e-12 seq3452 84.2 2e-11 >seq3388 Length=2974 Score = 140 bits (154), Expect = 4e-28 Identities = 159/211 (75%), Gaps = 2/211 (1%) Strand=Plus/Plus Query 46384 CACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTC 46443 |||||| || | || |||||| ||||| ||||||||| || ||||| |||| || Sbjct 506 CACCAGGTGGAGCGTCGACTCCTTCTGGATGTTGTAGTCGCTGAGCGTGCGGCCGTCCTC 565 Query 46444 GAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCAT 46503 |||||||||||| || || || | ||||||||||| | || | | |||||||||| Sbjct 566 GAGCTGCTTGCCCGCAAAGATGAGCCGCTGCTGGTCCGGGGGGATACCCTCCTTGTCCTG 625 Query 46504 GATCTTCTTCTTGAGCGTCG-CCACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTT 46562 || ||| ||||| || || | | |||||||||||| || || || | |||||| || | Sbjct 626 GACCTTGGACTTGA-CGACGTCGATCGTGTCGCTCGACTCGACCTCGAGCGTGATCGTCT 684 Query 46563 TGCCCGTCAGCGTTTTAACAAAGATTTGCAT 46593 ||||||| ||||| || | ||||||||||| Sbjct 685 TGCCCGTGAGCGTCTTGATGAAGATTTGCAT 715 >seq884 Length=2618 Score = 120 bits (132), Expect = 3e-22 Identities = 105/131 (80%), Gaps = 0/131 (0%) Strand=Plus/Plus Query 46379 CGCAACACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCG 46438 ||||| || || |||| ||| |||||| ||||| ||||||||| || |||||| || Sbjct 2300 CGCAAAACGAGGTGCAGCGTAGACTCCTTCTGGATGTTGTAGTCGCTCAGCGTGCGCCCG 2359 Query 46439 TCGTCGAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTG 46498 || ||||||||||||||||| || || | ||||||||| |||| ||| | || ||||||| Sbjct 2360 TCCTCGAGCTGCTTGCCGGCAAAGATGAGGCGCTGCTGATCGGGCGGAATGCCCTCCTTG 2419 Query 46499 TCCATGATCTT 46509 ||| |||||| Sbjct 2420 TCCTGGATCTT 2430 >seq1050 Length=2041 Score = 104 bits (114), Expect = 3e-17 Identities = 138/192 (72%), Gaps = 0/192 (0%) Strand=Plus/Plus Query 46402 CTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAA 46461 |||||| ||||| ||||||||| || || || | || |||||||||||||| || || Sbjct 117 CTCCTTCTGGATGTTGTAGTCGCTCAGGGTACGGCCATCCTCGAGCTGCTTGCCCGCAAA 176 Query 46462 TATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGT 46521 |||| ||||| ||||| | || | || ||||||||| |||||| ||||| | Sbjct 177 GATCAGACGCTGTTGGTCCGGAGGAATGCCCTCCTTGTCTTGGATCTTTGCCTTGACGTT 236 Query 46522 CGCCACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAAC 46581 | | | ||||||| ||| || || || | ||||| || || || ||||| || || || Sbjct 237 CTCGATCGTGTCGGACGACTCGACTTCGAGTGTGATCGTCTTTCCTGTCAGAGTCTTTAC 296 Query 46582 AAAGATTTGCAT 46593 || | ||||| Sbjct 297 GAAAACCTGCAT 308 >seq975 Length=2222 Score = 102 bits (112), Expect = 9e-17 Identities = 101/131 (77%), Gaps = 0/131 (0%) Strand=Plus/Minus Query 46379 CGCAACACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCG 46438 |||| || || |||| || |||||| ||||| ||||||||| || |||||| || Sbjct 431 CGCAGGACGAGGTGCAGCGTCGACTCCTTCTGGATGTTGTAGTCGCTCAGCGTGCGCCCG 372 Query 46439 TCGTCGAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTG 46498 || ||||||||||||||||| || || | ||||||||||| | ||| | || |||||| Sbjct 371 TCCTCGAGCTGCTTGCCGGCAAAGATGAGACGCTGCTGGTCCGGCGGGATGCCCTCCTTA 312 Query 46499 TCCATGATCTT 46509 ||| |||||| Sbjct 311 TCCTGGATCTT 301 >seq1153 Length=1838 Score = 86.0 bits (94), Expect = 7e-12 Identities = 128/182 (70%), Gaps = 0/182 (0%) Strand=Plus/Plus Query 46412 ATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAAGCGC 46471 || ||||||||| || || || | || || ||||||||||| || || || | |||| Sbjct 1 ATGTTGTAGTCGCTCAGCGTACGGCCATCCTCAAGCTGCTTGCCAGCAAAGATAAGGCGC 60 Query 46472 TGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGTCGCCACCGTG 46531 |||||||| | || | | |||||||||| |||||| ||||| || | | |||| Sbjct 61 TGCTGGTCCGGGGGAATACCCTCCTTGTCCTGGATCTTGGCCTTGACGTTCTCGATCGTG 120 Query 46532 TCGCTCGATTCCACATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAACAAAGATTTGC 46591 || || || || || | ||| || || || || ||||| || ||||| || | ||| Sbjct 121 TCCGAGGACTCGACCTCGAGCGTAATCGTCTTTCCTGTCAGGGTCTTAACGAAAACCTGC 180 Query 46592 AT 46593 || Sbjct 181 AT 182 >seq3452 Length=2631 Score = 84.2 bits (92), Expect = 2e-11 Identities = 121/171 (71%), Gaps = 0/171 (0%) Strand=Plus/Minus Query 46402 CTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAA 46461 |||||| ||||| ||||||||| || || || | || || ||||||||||| || || Sbjct 173 CTCCTTCTGGATGTTGTAGTCGCTCAGGGTACGGCCATCCTCAAGCTGCTTGCCCGCAAA 114 Query 46462 TATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGT 46521 |||| ||||| ||||| | || | || |||||| || |||||| ||| | | Sbjct 113 GATCAGACGCTGTTGGTCCGGAGGAATGCCCTCCTTATCTTGAATCTTCGCCTTCACGTT 54 Query 46522 CGCCACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTTTGCCCGTCAG 46572 | | ||||| ||||||||| |||| || || || |||||||| || Sbjct 53 TTCAATGGTGTCAGACGATTCCACTTCCAATGTAATCGTCTTGCCCGTAAG 3 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 565213953439200