Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Malassezia_20furfur_20[genbank_20GCA_5F001265055.1_202015-08-11] 3,460 sequences; 13,865,456 total letters Query= NC_015326.1 Length=346754 Score E Sequences producing significant alignments: (Bits) Value seq1050 176 1e-38 seq3452 136 9e-27 seq1153 125 2e-23 seq1790 118 2e-21 seq884 89.7 1e-12 >seq1050 Length=2041 Score = 176 bits (194), Expect = 1e-38 Identities = 169/217 (78%), Gaps = 0/217 (0%) Strand=Plus/Plus Query 194932 ACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCG 194991 || |||||||| || ||||| || || || ||||| ||| || || | ||||| ||| Sbjct 100 ACGAGGTGAAGCGTCGACTCCTTCTGGATGTTGTAGTCGCTCAGGGTACGGCCATCCTCG 159 Query 194992 AGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGA 195051 |||||||| || || ||||| || || |||||||| ||||||||||| || |||||||| Sbjct 160 AGCTGCTTGCCCGCAAAGATCAGACGCTGTTGGTCCGGAGGAATGCCCTCCTTGTCTTGG 219 Query 195052 ATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTT 195111 || ||| |||||||||||| || ||||| || || ||||| || || | ||||||| Sbjct 220 ATCTTTGCCTTGACGTTCTCGATCGTGTCGGACGACTCGACTTCGAGTGTGATCGTCTTT 279 Query 195112 CCTGTCAAAGTTTTTACGAACACTTGCATTTATGGTT 195148 ||||||| ||| |||||||| || ||||| | || || Sbjct 280 CCTGTCAGAGTCTTTACGAAAACCTGCATGTGTGTTT 316 >seq3452 Length=2631 Score = 136 bits (150), Expect = 9e-27 Identities = 138/180 (77%), Gaps = 0/180 (0%) Strand=Plus/Minus Query 194937 GTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCGAGCTG 194996 |||||| || ||||| || || || ||||| ||| || || | ||||| || ||||| Sbjct 185 GTGAAGCGTCGACTCCTTCTGGATGTTGTAGTCGCTCAGGGTACGGCCATCCTCAAGCTG 126 Query 194997 CTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGAATTTT 195056 ||| || || ||||| || || |||||||| ||||||||||| || || |||||||| || Sbjct 125 CTTGCCCGCAAAGATCAGACGCTGTTGGTCCGGAGGAATGCCCTCCTTATCTTGAATCTT 66 Query 195057 TTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTTCCTGT 195116 ||| ||||| ||||||||||| || ||||||||| | |||| |||||| || || Sbjct 65 CGCCTTCACGTTTTCAATGGTGTCAGACGATTCCACTTCCAATGTAATCGTCTTGCCCGT 6 Score = 113 bits (124), Expect = 1e-19 Identities = 100/125 (80%), Gaps = 0/125 (0%) Strand=Plus/Minus Query 194932 ACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCG 194991 || |||||||| || ||||| || || || ||||| ||| ||||| | ||| ||||| Sbjct 418 ACGAGGTGAAGCGTCGACTCCTTCTGGATGTTGTAGTCGCTCAGAGTACGCCCGTCTTCC 359 Query 194992 AGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGA 195051 || |||||||| |||||||| || || ||||||||||||||||| || || ||||| ||| Sbjct 358 AGTTGCTTACCGGCGAAGATCAGGCGCTGTTGGTCTGGAGGAATACCCTCCTTGTCCTGA 299 Query 195052 ATTTT 195056 || || Sbjct 298 ATCTT 294 >seq1153 Length=1838 Score = 125 bits (138), Expect = 2e-23 Identities = 137/182 (75%), Gaps = 0/182 (0%) Strand=Plus/Plus Query 194959 ATATTGTAATCGGCAAGAGTTCTCCCATCTTCGAGCTGCTTACCTGCGAAGATAAGTCGT 195018 || ||||| ||| || || | ||||| || |||||||| || || |||||||| || Sbjct 1 ATGTTGTAGTCGCTCAGCGTACGGCCATCCTCAAGCTGCTTGCCAGCAAAGATAAGGCGC 60 Query 195019 TGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGAATTTTTTGCTTGACGTTCTCAATGGTG 195078 || ||||| || ||||| || || ||||| || || || |||||||||||| || ||| Sbjct 61 TGCTGGTCCGGGGGAATACCCTCCTTGTCCTGGATCTTGGCCTTGACGTTCTCGATCGTG 120 Query 195079 TCCGAACTTTCCACTTCAAGGGTAACCGTCTTTCCTGTCAAAGTTTTTACGAACACTTGC 195138 ||||| || || || || |||| |||||||||||||| || || ||||| || ||| Sbjct 121 TCCGAGGACTCGACCTCGAGCGTAATCGTCTTTCCTGTCAGGGTCTTAACGAAAACCTGC 180 Query 195139 AT 195140 || Sbjct 181 AT 182 >seq1790 Length=18119 Score = 118 bits (130), Expect = 2e-21 Identities = 110/140 (79%), Gaps = 0/140 (0%) Strand=Plus/Minus Query 194932 ACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCG 194991 || |||||||| || ||||| || ||||| ||||| ||| || || | ||||| || Sbjct 140 ACGAGGTGAAGCGTCGACTCCTTCTGAATGTTGTAGTCGCTCAGCGTACGGCCATCCTCA 81 Query 194992 AGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGA 195051 ||||||||||| || ||||| || || |||||||| || |||||||| || ||||| ||| Sbjct 80 AGCTGCTTACCAGCAAAGATCAGGCGCTGTTGGTCCGGGGGAATGCCCTCCTTGTCCTGA 21 Query 195052 ATTTTTTGCTTGACGTTCTC 195071 || || |||||||||||| Sbjct 20 ATCTTCGCCTTGACGTTCTC 1 >seq884 Length=2618 Score = 89.7 bits (98), Expect = 1e-12 Identities = 97/129 (75%), Gaps = 0/129 (0%) Strand=Plus/Plus Query 194928 CAAAACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATC 194987 |||||| ||||| || || ||||| || || || ||||| ||| || || | ||| || Sbjct 2302 CAAAACGAGGTGCAGCGTAGACTCCTTCTGGATGTTGTAGTCGCTCAGCGTGCGCCCGTC 2361 Query 194988 TTCGAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTC 195047 ||||||||||| || || ||||| || || || || || || |||||||| || ||||| Sbjct 2362 CTCGAGCTGCTTGCCGGCAAAGATGAGGCGCTGCTGATCGGGCGGAATGCCCTCCTTGTC 2421 Query 195048 TTGAATTTT 195056 || || || Sbjct 2422 CTGGATCTT 2430 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1109432415293820