Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Malassezia_20furfur_20[genbank_20GCA_5F001265055.1_202015-08-11] 3,460 sequences; 13,865,456 total letters Query= NC_021312.1 Length=459984 Score E Sequences producing significant alignments: (Bits) Value seq3072 93.3 1e-13 seq2796 93.3 1e-13 seq1991 84.2 6e-11 >seq3072 Length=5447 Score = 93.3 bits (102), Expect = 1e-13 Identities = 177/259 (68%), Gaps = 4/259 (2%) Strand=Plus/Minus Query 302620 GTTTTTACAGCTGTATCAATTAGACCAACACGACCACCCATAGCATGGAAGAATAGCTCT 302679 || || || || || || || || || | || || |||| || |||||||| | ||| Sbjct 2524 GTCTTGACCGCGGTGTCGATCAGCCCCTCGCGCCCGGCCATCGCGTGGAAGAAGAACTCG 2465 Query 302680 TCCGGTCGTAGCCCCCCAATAAAGGAGCTCTCAACGAAACCACGCGCCTCGGGCGAATCG 302739 | || || || | | | ||| |||| ||||| || |||| |||||||| | Sbjct 2464 TGCGCGGTGAGGCCGCGCAGGTACGAGTTCTCGACGAACCCGCGCGACTCGGGCGTGAAG 2405 Query 302740 TCGAACTTGGTAAAGTGTGGCAGGGTCCTGTTCTCATAGCCGTATGGGATACGCTTTCCA 302799 ||| |||||||||||| |||||| | | || ||||| | ||||| ||||| || Sbjct 2404 TCGTCCTTGGTAAAGTGCGGCAGGCTGCGGTGGCGGAAGCCGAACGGGATGCGCTTGCCC 2345 Query 302800 TCAACGTTCTGCTGTCCCAGGCACGAAATCATCTGCGAAATATTTA--AATCACTGCCCT 302857 || ||| |||||| || | ||||| ||||||||| || || | || | ||||| Sbjct 2344 TCGACGGACTGCTGGCCGACGCACGCGGACATCTGCGAGATGTTGATGAACGA--GCCCT 2287 Query 302858 TGGAGCCAGCATTTACCAT 302876 ||||||| || | ||||| Sbjct 2286 TGGAGCCCGCGATCACCAT 2268 >seq2796 Length=74167 Score = 93.3 bits (102), Expect = 1e-13 Identities = 120/166 (72%), Gaps = 0/166 (0%) Strand=Plus/Plus Query 251488 CCGTGTGAAATCATACAATCACGCTCCATTTCACCGAAACGAAGACCACCATCGCGAGCC 251547 ||||| || |||||||| || |||||||| ||||||||||| |||||||| ||||| | Sbjct 42130 CCGTGCGAGATCATACAGTCGCGCTCCATCTCACCGAAACGCAGACCACCGTCGCGCGAG 42189 Query 251548 CTACCCTCGGCAGGCTGACGAGTGAGATTAACCATAGGACCGATGGAGCGGCTATGTTGC 251607 | ||||||| | ||||| || ||||| | || ||| || | || || | Sbjct 42190 CGACCCTCGACGGGCTGGCGTGTGAGGATCTGCACAGGCCCACGCGCACGCGAGTGGATC 42249 Query 251608 TTATCATTTACCATATGCTTGAGACGCTGGTAGAATGCGGGACCGA 251653 || || | ||||||||||| || ||||||||| | | || |||| Sbjct 42250 TTGTCGTCGACCATATGCTTCAGGCGCTGGTAGTAGGTAGGGCCGA 42295 >seq1991 Length=16845 Score = 84.2 bits (92), Expect = 6e-11 Identities = 175/259 (68%), Gaps = 4/259 (2%) Strand=Plus/Minus Query 302620 GTTTTTACAGCTGTATCAATTAGACCAACACGACCACCCATAGCATGGAAGAATAGCTCT 302679 || || || || || || || ||||| | || || |||| || |||||||| | ||| Sbjct 2521 GTCTTGACCGCGGTGTCGATCAGACCCTCGCGCCCGGCCATGGCGTGGAAGAAGAACTCG 2462 Query 302680 TCCGGTCGTAGCCCCCCAATAAAGGAGCTCTCAACGAAACCACGCGCCTCGGGCGAATCG 302739 | || || || | | | ||| |||| || || ||||||| |||||||| | Sbjct 2461 TGCGCGGTGAGGCCACGCAGGTACGAGTTCTCGACAAACCCACGCGACTCGGGCGTGAAG 2402 Query 302740 TCGAACTTGGTAAAGTGTGGCAGGGTCCTGTTCTCATAGCCGTATGGGATACGCTTTCCA 302799 ||| |||||| ||||| |||||| | | || ||||| | || || ||||| || Sbjct 2401 TCGTCCTTGGTGAAGTGCGGCAGGCTGCGGTGGCGGAAGCCGAACGGAATGCGCTTGCCC 2342 Query 302800 TCAACGTTCTGCTGTCCCAGGCACGAAATCATCTGCGAAATATTTA--AATCACTGCCCT 302857 || || |||||| || | ||||| ||| ||||| || || | || | ||||| Sbjct 2341 TCGACCGACTGCTGGCCGACGCACGCGGACATTTGCGAGATGTTGATGAACGA--GCCCT 2284 Query 302858 TGGAGCCAGCATTTACCAT 302876 ||||||| ||| | ||||| Sbjct 2283 TGGAGCCGGCAATGACCAT 2265 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1471752352486020