Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Malassezia_20furfur_20[genbank_20GCA_5F001265055.1_202015-08-11] 3,460 sequences; 13,865,456 total letters Query= NC_026511.1 Length=140913 Score E Sequences producing significant alignments: (Bits) Value seq3388 113 4e-20 seq1790 87.8 2e-12 seq1153 86.0 6e-12 seq975 82.4 7e-11 >seq3388 Length=2974 Score = 113 bits (124), Expect = 4e-20 Identities = 153/211 (73%), Gaps = 2/211 (1%) Strand=Plus/Plus Query 35527 CACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTC 35586 ||||| || | ||| |||||| || |||||||| ||| | || || |||| || Sbjct 506 CACCAGGTGGAGCGTCGACTCCTTCTGGATGTTGTAGTCGCTGAGCGTGCGGCCGTCCTC 565 Query 35587 CAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCAT 35646 |||||||| |||||||| || | |||||||||||||| || | | |||||||||| Sbjct 566 GAGCTGCTTGCCCGCAAAGATGAGCCGCTGCTGGTCCGGGGGGATACCCTCCTTGTCCTG 625 Query 35647 GATCTTTTGCTTCA-GAGTTGCCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTT 35705 || ||| ||| | || | | | |||||||||||| || ||||| | ||||||||| | Sbjct 626 GACCTTGGACTTGACGACGT-CGATCGTGTCGCTCGACTCGACCTCGAGCGTGATCGTCT 684 Query 35706 TACCCGTCAAAGTTTTCACAAATATCTGCAT 35736 | ||||| | || || | || || ||||| Sbjct 685 TGCCCGTGAGCGTCTTGATGAAGATTTGCAT 715 >seq1790 Length=18119 Score = 87.8 bits (96), Expect = 2e-12 Identities = 84/108 (78%), Gaps = 0/108 (0%) Strand=Plus/Minus Query 35545 CTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAA 35604 |||||| ||||||||||| ||| || || || | || || ||||||||||| ||||| Sbjct 123 CTCCTTCTGAATGTTGTAGTCGCTCAGCGTACGGCCATCCTCAAGCTGCTTACCAGCAAA 64 Query 35605 TATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTT 35652 |||| ||||| ||||||| |||| || |||||||||| ||||| Sbjct 63 GATCAGGCGCTGTTGGTCCGGGGGAATGCCCTCCTTGTCCTGAATCTT 16 >seq1153 Length=1838 Score = 86.0 bits (94), Expect = 6e-12 Identities = 128/182 (70%), Gaps = 0/182 (0%) Strand=Plus/Plus Query 35555 ATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAATATCAACCGC 35614 |||||||| ||| || || || | || || |||||||| || ||||| || | ||| Sbjct 1 ATGTTGTAGTCGCTCAGCGTACGGCCATCCTCAAGCTGCTTGCCAGCAAAGATAAGGCGC 60 Query 35615 TGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGTTGCCACCGTG 35674 |||||||||| |||| | |||||||||| |||||| ||| | | | | |||| Sbjct 61 TGCTGGTCCGGGGGAATACCCTCCTTGTCCTGGATCTTGGCCTTGACGTTCTCGATCGTG 120 Query 35675 TCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCACAAATATCTGC 35734 || || || ||||| | ||| ||||| || || |||| || || || || | |||| Sbjct 121 TCCGAGGACTCGACCTCGAGCGTAATCGTCTTTCCTGTCAGGGTCTTAACGAAAACCTGC 180 Query 35735 AT 35736 || Sbjct 181 AT 182 >seq975 Length=2222 Score = 82.4 bits (90), Expect = 7e-11 Identities = 83/108 (77%), Gaps = 0/108 (0%) Strand=Plus/Minus Query 35545 CTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAA 35604 |||||| || |||||||| ||| || || ||| |||| || |||||||| || ||||| Sbjct 408 CTCCTTCTGGATGTTGTAGTCGCTCAGCGTGCGCCCGTCCTCGAGCTGCTTGCCGGCAAA 349 Query 35605 TATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTT 35652 || | ||||||||||||| || | || |||||| ||| |||||| Sbjct 348 GATGAGACGCTGCTGGTCCGGCGGGATGCCCTCCTTATCCTGGATCTT 301 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 450774103176800