Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Malassezia_20furfur_20[genbank_20GCA_5F001265055.1_202015-08-11] 3,460 sequences; 13,865,456 total letters Query= NC_028091.1 Length=196300 Score E Sequences producing significant alignments: (Bits) Value seq3093 141 1e-28 seq3271 111 2e-19 >seq3093 Length=5234 Score = 141 bits (156), Expect = 1e-28 Identities = 557/865 (64%), Gaps = 17/865 (2%) Strand=Plus/Minus Query 111230 GGAAGGGCGATTGATGCCAAATTGCAAACAGCCGTCTCATCCTTATCTGTGTACTCTAAA 111289 || || || || || || | ||||| || |||||||| || ||||||| | Sbjct 1849 GGGAGCGCAATCGACGCGAGGTTGCACACCGCCGTCTCGTCGGGCGAGCTGTACTCCATG 1790 Query 111290 ATTTCTGTACATAAGTTGGAACTCTTAATCGTCCCCAAATTCTTTTGGTTACTCTTCTTG 111349 || || || || | ||| || ||||| ||| || | ||||| ||||| ||||| | Sbjct 1789 ATCTCGGTGCACAGGTTCGAGCTCTTGATCACGCCGACGTTCTTCTGGTTGCTCTTGCGG 1730 Query 111350 TTGCACGCATCCTTGTAGAGCATGTAGGGCGTCCCCGTCTCCGTCTGTGATTTGAGAATA 111409 || || ||||||||||||||| | ||||| |||||||| |||| | | ||| || Sbjct 1729 TTCGCGGCGTCCTTGTAGAGCATGAACGGCGTGCCCGTCTCAATCTGCGCCTCGAGGATC 1670 Query 111410 GCCTTCCA-AACATCGGCGGCTGGTACAATGGCGTTGGCCCGTCCCTCCGCCTCGTACTT 111468 || | ||| | | || ||| || | || || ||| | || ||||| |||||| Sbjct 1669 GCGTACCAGAGCTTCTGCGCCTTG-ACGGTGCGCTTGCCGCGGCCCTCGCGCTCGTAGCG 1611 Query 111469 TGTGTAGAGGGCTTCAAACTCCTCACCCACCGCGTCGGAGAGACCTGGTGCCTTGTCTGG 111528 ||| || | ||||||||||| || ||||| ||| || || |||| | | || Sbjct 1610 CTCGTACAGCTCGTCAAACTCCTCGCCGTAGCAGTCGGCGAGGCCGGGCGCCTCGGCGGG 1551 Query 111529 ACAGAAAAGAGACCATTGACCACCTTCCTCAACCCGCTTCATGAAAAGGTCTGGAATCCA 111588 || | || | ||| | || || | ||| || || ||| || ||||| || | ||| Sbjct 1550 GCACATCAGCGTCCAGTCGCCGCCCTGCTCGACACGGCGCATAAACAGGTCCGGCACCCA 1491 Query 111589 CAGGGATGAAAAGAGATCTCTACACCGAGCCTCTTCGTCACCTTGGTTGAGTCGTAACTC 111648 ||| | | || || || | || ||||||| | || ||||| || | || Sbjct 1490 CAGCGCGTAGAACAGGTCGCGCGCGCGCACCTCTTCCTTGCCGTGGTTCTTGCGCAGGTC 1431 Query 111649 AAGGAACTCCATGATATCCGCGTGCCATGGCTCAAGATAGACTGCGATAGATCC----CT 111704 | ||||| | | |||| |||||| ||||| || |||| || | | || | Sbjct 1430 GATAAACTCAAACACGTCCGAGTGCCACGGCTCGAGGTAGATGGCAAAGGCGCCGGGGCG 1371 Query 111705 TTCGACGCCCAGCTTGATTTACATAGCGCGCTGTGGCGTTAAATACGCGAAGCATTGGAA 111764 | | | ||| | || | || |||||||| ||| ||| | ||||| ||||| || | Sbjct 1370 CTTGTTG-CCACCCTGGTCGACGTAGCGCGCCGTGTTGTTGTACACGCGGAGCATGGGCA 1312 Query 111765 TAATACCATCTGAT-TGACCATTTGTCCCCCGAA--TACGAGATTTATTGGCTCTCACAT 111821 ||| || | || | ||| || || || || |||||| || | | | Sbjct 1311 CAATGCCGT-TGCTCACACCGTTCGTGCCGGCAATGTACGAG--CCCGTGCCGCGGATGC 1255 Query 111822 CATGGATGTGCATCCCAATACCCCCAGCCCACTTTGAGATTTGCGCACACTCCGTAAGAG 111881 ||||||| | ||||| || || ||| ||| ||||| ||||||| | | || | Sbjct 1254 AGTGGATGTTGAGACCAATGCCGCCCGCCGTCTTGGAGATCATCGCACACGACTTGAGCG 1195 Query 111882 TTCCATAGATACCGTTGATTGAGTCCTCCTTGTTGGCGATAAGGAAGCAACTGGACATCT 111941 | | ||||| || | ||| ||||| ||||| || | |||||||| ||||||| Sbjct 1194 TGTCGTAGATGCCCTCGATCGAGTCGTCCTTCATGCACACCAGGAAGCACGACGACATCT 1135 Query 111942 GCGGTCTTGGTGTACCAGCATTGAAGAGGGTTGGTGTTGCGTGAATGAA--CATACCTTG 111999 |||| || || || || || |||||||| || || | ||||| | || | | | | Sbjct 1134 GCGGGCTCGGCGTGCCCGCGTTGAAGAGCGTCGGCGAGGCGTGCGTAAAGGCCTTC--TC 1077 Query 112000 GGACATCTTGTCGTATGTCTCCAAGACAGAATCAATGTCTTCCCCGTGGATGCCGATTGC 112059 |||||| ||| ||| ||||| | | || | ||| ||||||||||| | || Sbjct 1076 CGACATCATGTTGTACGTCTCGATCGCGCTCTCGACGTCGGTGCCGTGGATGCCCACCGC 1017 Query 112060 GACCCGCATGAACATGTACTGTGGG 112084 || ||||||| ||||| ||| ||| Sbjct 1016 CACACGCATGAGCATGTGCTGGGGG 992 >seq3271 Length=3785 Score = 111 bits (122), Expect = 2e-19 Identities = 306/460 (67%), Gaps = 18/460 (4%) Strand=Plus/Plus Query 122369 CATAGTCCCCGACCCGCTTCTCAAAGAAGTTGGTCTTCCCATCAAGGCTAATGTTTTCCA 122428 ||||||| |||||| ||| || ||||| | ||| || | || ||| || |||| Sbjct 206 CATAGTCGCCGACCTTGCGCTCGAAAAAGTTCGACTTGCCCTGCAGCGAAATATTCTCCA 265 Query 122429 TAAAGTCAAATGGATTCTTCGCGTTCCAAAT----GGGTGGCAC--CCCAACTTGTTTGA 122482 ||||||| || || ||| ||||||| | |||| || | | | || || Sbjct 266 TAAAGTCGAAGGGGTTCGTCGCGTTGTAGTGCTTCGGGTTGCCCAGCGCCAC------GA 319 Query 122483 GGAGACGATCCGACACATACTCAATGTACTCGGACATCTTCTCAGAGTTCATACCGATGA 122542 | || || |||| |||| |||||||||||| | ||||| | ||||| || || | Sbjct 320 GCAGGCGGTCCGCCACAAACTCAATGTACTGGCACATCAGGCGCGCATTCATGCCAATCA 379 Query 122543 GGTTACATGGG-AGTGCGTCCAAGATGAACCCTTTCTCAATCTCAACCGCCTCTTTCACG 122601 | ||| ||| || ||||| | | ||| ||| ||||||| | |||||||| | | | Sbjct 380 GCG-ACACGGGCAGCGCGTCGGAAAGGAAGTCTTGCTCAATCGCCACCGCCTCGGTAATG 438 Query 122602 ATGGCGTGGATAGTTTCGGTAGTGGGTCTATTACGCAAAGTCTTGAAG-AGCTC-CACGG 122659 ||| || | || |||| ||| | | | | || || ||| |||| Sbjct 439 ATGCGGTTCACCGTGTCGGG-GTGCGCGCGCTTCTTGAGGTGGCCAAACAGCAGGCACG- 496 Query 122660 CAAACTCCTGGTGGAGACCCTCATCTCGGGAAATAAGTTCATTTGAGAAGCATAGACCTG 122719 |||| || ||| |||||||| || || || || || || || ||||| | || || | Sbjct 497 CAAAGTCGGTGTGCAGACCCTCGTCACGCGAGATGAGCTCGTTCGAGAACGACAGGCCGG 556 Query 122720 GCATGAGACCCCGCTTCTTCAACCAATAAATAGCGCAGAATGACCCGGAGAAGAAGATAC 122779 |||| ||||| |||||||||| ||| | || | | || || || ||||||||||| | Sbjct 557 GCATCAGACCGCGCTTCTTCAGCCAGAAGATCGAGGCAAACGAGCCCGAGAAGAAGATGC 616 Query 122780 CCTCCACACACGCAAACGCAAAAAGGCGTTCGGCGAAGGA 122819 ||||||| |||||||| | |||||| || | ||| || Sbjct 617 CCTCCACGGCGGCAAACGCCACAAGGCGCTCCGAGAACGA 656 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 628004837616000