Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Malassezia_20furfur_20[genbank_20GCA_5F001265055.1_202015-08-11] 3,460 sequences; 13,865,456 total letters Query= NC_028093.1 Length=182309 Score E Sequences producing significant alignments: (Bits) Value seq3093 152 6e-32 seq3271 100 3e-16 seq2953 82.4 9e-11 >seq3093 Length=5234 Score = 152 bits (168), Expect = 6e-32 Identities = 564/868 (65%), Gaps = 23/868 (3%) Strand=Plus/Plus Query 104221 CCCACAGTACATGTTCATGCGCGTGGCCATCGGTATTCATGGGGAAGACATTGATTCTGT 104280 ||| ||| ||||| ||||||| ||||| | || || || || ||| | || | Sbjct 992 CCCCCAGCACATGCTCATGCGTGTGGCGGTGGGCATCCACGGCACCGACGTCGAGAGCGC 1051 Query 104281 CTTGGAGACATACGACAAGATGTCCCAAGGTATG--TTCATTCACGCAACACCAACCCTC 104338 | ||||| ||| ||| |||||| | | | | || | ||||| | || || ||| Sbjct 1052 GATCGAGACGTACAACATGATGTCGGA--GAAGGCCTTTACGCACGCCTCGCCGACGCTC 1109 Query 104339 TTCAATGCTGGTACACCAAGACCCCAAATGTCCAGTTGCTTCCTTATCGCCAACAAGGAG 104398 ||||| || || || || || || || ||||| |||||||| | || ||||| Sbjct 1110 TTCAACGCGGGCACGCCGAGCCCGCAGATGTCGTCGTGCTTCCTGGTGTGCATGAAGGAC 1169 Query 104399 GACTCAATCAACGGTATCTATGGAACTCTTACGGAGTGTGCGCAAATCTCAAAGTGGGCT 104458 ||||| ||| | || ||||| | || || | | ||||||| ||||| ||| ||| Sbjct 1170 GACTCGATCGAGGGCATCTACGACACGCTCAAGTCGTGTGCGATGATCTCCAAGACGGCG 1229 Query 104459 GGGGGTATTGGGATGCACATCCATGATGTGAGAGCCAATAAATCTCGTA--TTCGGGGGA 104516 || || ||||| | ||||||| | | | || |||||| || || | Sbjct 1230 GGCGGCATTGGTCTCAACATCCACTGCATCCGCGGCACGGG--CTCGTACATTGCCGGCA 1287 Query 104517 CAAATGGTCA-ATCAGATGGTATTATTCCAATGCTTCGCGTATTTAACGCCACAGCGCGC 104575 | || ||| | || | || ||| | || ||||| ||||| | ||| ||| |||||| Sbjct 1288 CGAACGGTGTGAGCA-ACGGCATTGTGCCCATGCTCCGCGTGTACAACAACACGGCGCGC 1346 Query 104576 TATGTAAATCAAGCTGGGCGTCGAAAG----GGATCTATCGCAGTCTATCTTGAGCCATG 104631 || || | || | ||| | | | | || | | || |||| || ||||| || Sbjct 1347 TACGTCGACCAGGGTGG-CAACAAGCGCCCCGGCGCCTTTGCCATCTACCTCGAGCCGTG 1405 Query 104632 GCACGCGGATATCATGGAGTTCCTTGAGTTGCGTCTCAACCAAGGTGACGAGGAGGCGCG 104691 |||| |||| | | ||||| | || |||| ||||| || | || |||| ||| Sbjct 1406 GCACTCGGACGTGTTTGAGTTTATCGACCTGCGCAAGAACCACGGCAAGGAAGAGGTGCG 1465 Query 104692 GTGCCGCGATCTCTTCTCCGCTCTCTGGATTCCAGATCTCTTCATGAAGAGAGTTGAGGA 104751 ||||| || |||| ||| || ||| | || || || || ||| | || ||| | Sbjct 1466 CGCGCGCGACCTGTTCTACGCGCTGTGGGTGCCGGACCTGTTTATGCGCCGTGTCGAGCA 1525 Query 104752 GAGTGGCAATTGGTCTCTCTTTTGTCCAGACAAGGCACCTGGTCTCTCCGATGCCGTGGG 104811 | | ||| | ||| | || | || || | | |||| || || ||| |||| | || Sbjct 1526 GGGCGGCGACTGGACGCTGATGTGCCCCGCCGAGGCGCCCGGCCTCGCCGACTGCTACGG 1585 Query 104812 TGAGGAGTTTGAAGCCCTTTACACAAAGTACGAGGAAGAAGGTCG-GGCGACTGCGACGG 104870 ||||||||||| | || ||| |||||| || || || ||| | || || | Sbjct 1586 CGAGGAGTTTGACGAGCTGTACGAGCGCTACGAGCGCGAGGGCCGCGGCAAGCGC-ACCG 1644 Query 104871 TGCCAGCTGCCGATG-TGTGGAAAGCTATTCTCAAGTCTCAAACCGAGACTGGTACACCA 104929 | | || || || | | ||| | || || ||| || | || | ||||| || || || Sbjct 1645 T-CAAGGCGCAGAAGCTCTGGTACGCGATCCTCGAGGCGCAGATTGAGACGGGCACGCCG 1703 Query 104930 TACATGCTTTACAAAGACGCCTGTAACCAAAAGAGTAATCAAAAGAATTTGGGTGTGATC 104989 | |||||| ||||| |||||| |||| ||||| || || ||||| | || |||||| Sbjct 1704 TTCATGCTCTACAAGGACGCCGCGAACCGCAAGAGCAACCAGAAGAACGTCGGCGTGATC 1763 Query 104990 AAGAGTTCCAATCTCTGTACAGAAATCTTGGAATTTACAG--ACAAAGATGAGACGGCTG 105047 ||||| || || || || || || ||| |||| ||||| || |||||||| | Sbjct 1764 AAGAGCTCGAACCTGTGCACCGAGATCATGGA--GTACAGCTCGCCCGACGAGACGGCGG 1821 Query 105048 TGTGTAACCTCGCATCAATCGCTCTCCC 105075 |||| |||||||| || || || ||||| Sbjct 1822 TGTGCAACCTCGCGTCGATTGCGCTCCC 1849 >seq3271 Length=3785 Score = 100 bits (110), Expect = 3e-16 Identities = 114/153 (75%), Gaps = 0/153 (0%) Strand=Plus/Minus Query 94804 GAGCGACTCTTCGCATTTGCGTGTGTTGAGGGTATCTTCTTCTCTGGTTCCTTCTGCGCT 94863 ||||| || | || ||||| || ||||| ||||||||||| || || || | | Sbjct 647 GAGCGCCTTGTGGCGTTTGCCGCCGTGGAGGGCATCTTCTTCTCGGGCTCGTTTGCCTCG 588 Query 94864 ATTTATTGGCTCAAGAAGCGAGGTCTCATGCCAGGTCTCTGCTTCTCCAACGAGCTTATC 94923 || | ||||| |||||||| ||||| ||||| || || | ||||| |||||||| ||| Sbjct 587 ATCTTCTGGCTGAAGAAGCGCGGTCTGATGCCCGGCCTGTCGTTCTCGAACGAGCTCATC 528 Query 94924 TCTCGTGACGAGGGACTCCACCAAGAGTTTGCG 94956 || ||||||||||| || ||| || |||||| Sbjct 527 TCGCGTGACGAGGGTCTGCACACCGACTTTGCG 495 >seq2953 Length=7094 Score = 82.4 bits (90), Expect = 9e-11 Identities = 199/298 (67%), Gaps = 10/298 (3%) Strand=Plus/Plus Query 169160 TTGAGAATGAGACCCTTGATGTGGGAACCGTCGTTATCGGCATCCGTCATGATCATGAGA 169219 |||| || || ||||||||||| || ||||| || || ||||||||||| ||| Sbjct 2177 TTGATGATCAGGCCCTTGATGTGCGACCCGTCAAAGTCCTGGTCGGTCATGATCATCAGA 2236 Query 169220 CGACCATACCGAAGCTCGGAAACATCTTGATAGTCCTTACCCTGTTGAAGACCCAAGATC 169279 | || || || ||| | || | |||| ||| || || || || |||| |||| Sbjct 2237 CTGCCGTAGCGCAGCCCATCGACCGAGTCGTAGTGCTTGCCGTGCTGCAGCCCCAGGATC 2296 Query 169280 TTCTTGAGATCGTTGAACTC----TTGGT-TTGATGTGAGCTGTGTGACAGAGGCATCGC 169334 | |||| | |||| ||| ||| | ||||| || ||| | | || |||| Sbjct 2297 TCTTTGATGTTTTTGATCTCGGCATTGTTCTTGATC-GACTCGTGCGTC----GCCTCGC 2351 Query 169335 GAACATTCTTACACTTCCCACGAAGAGGGAAGACACCGTAGTGATCACGACCAACGACGG 169394 | ||||| ||| || || || || || || ||||| || || || || || Sbjct 2352 GCACATTGAGCAGCTTGCCGCGCAGCGGAAACACGCCGTACGCGTCGCGGCCCACCTCGC 2411 Query 169395 AGAGACCCGCGACTGCGAGAGTCTTCGCCGAGTCACCCTCGGTGACGATGAGCGTACA 169452 ||||||| || ||||| | ||| ||||||||||||||||||| ||| ||||| || Sbjct 2412 TCAGACCCGACACGGCGAGCGCCTTGGCCGAGTCACCCTCGGTGAGGATCAGCGTGCA 2469 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 583235573970400