Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Malassezia_20furfur_20[genbank_20GCA_5F001265055.1_202015-08-11] 3,460 sequences; 13,865,456 total letters Query= NC_028094.1 Length=473558 Score E Sequences producing significant alignments: (Bits) Value seq3452 118 3e-21 seq1153 102 2e-16 seq1790 91.5 4e-13 >seq3452 Length=2631 Score = 118 bits (130), Expect = 3e-21 Identities = 154/213 (72%), Gaps = 0/213 (0%) Strand=Plus/Minus Query 140504 TTACATACCACCACGTAATCTTAGAACAAGATGAAGAGTAGACTCTTTTTGAATATTATA 140563 || |||||||||||| | | || || | ||||| || ||||| || || || || || Sbjct 215 TTGCATACCACCACGAAGACGGAGGACCAAGTGAAGCGTCGACTCCTTCTGGATGTTGTA 156 Query 140564 ATCAGATAATGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGATC 140623 || | || || ||||| ||||| || || || |||||||| ||||| || || || Sbjct 155 GTCGCTCAGGGTACGGCCATCCTCAAGCTGCTTGCCCGCAAAGATCAGACGCTGTTGGTC 96 Query 140624 AGGAGGAATTCCTTCTTTATCCTGAATTTTAGCTTTTACATTATCAATCGAATCAGATGG 140683 |||||||| || || ||||| ||||| || || || || || ||||| | ||||| | Sbjct 95 CGGAGGAATGCCCTCCTTATCTTGAATCTTCGCCTTCACGTTTTCAATGGTGTCAGACGA 36 Query 140684 TTCAACTTCAAGTGTAACTGTCTTTCCGGTTAG 140716 ||| ||||| | ||||| ||||| || || || Sbjct 35 TTCCACTTCCAATGTAATCGTCTTGCCCGTAAG 3 >seq1153 Length=1838 Score = 102 bits (112), Expect = 2e-16 Identities = 121/164 (74%), Gaps = 0/164 (0%) Strand=Plus/Plus Query 140574 GTTCGCCCATCTTCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGATCAGGAGGAATT 140633 || || ||||| ||||| || || ||||||||||| || || ||||| || || ||||| Sbjct 19 GTACGGCCATCCTCAAGCTGCTTGCCAGCAAAGATAAGGCGCTGCTGGTCCGGGGGAATA 78 Query 140634 CCTTCTTTATCCTGAATTTTAGCTTTTACATTATCAATCGAATCAGATGGTTCAACTTCA 140693 || || || ||||| || || || || || || || |||| || || | || || || Sbjct 79 CCCTCCTTGTCCTGGATCTTGGCCTTGACGTTCTCGATCGTGTCCGAGGACTCGACCTCG 138 Query 140694 AGTGTAACTGTCTTTCCGGTTAGTGTTTTTACAAAAATCTGCAT 140737 || |||| |||||||| || || || || || |||| |||||| Sbjct 139 AGCGTAATCGTCTTTCCTGTCAGGGTCTTAACGAAAACCTGCAT 182 >seq1790 Length=18119 Score = 91.5 bits (100), Expect = 4e-13 Identities = 116/160 (73%), Gaps = 0/160 (0%) Strand=Plus/Minus Query 140509 TACCACCACGTAATCTTAGAACAAGATGAAGAGTAGACTCTTTTTGAATATTATAATCAG 140568 |||||||||| | | || || || ||||| || ||||| || ||||| || || || Sbjct 160 TACCACCACGCAGACGGAGGACGAGGTGAAGCGTCGACTCCTTCTGAATGTTGTAGTCGC 101 Query 140569 ATAATGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGATCAGGAG 140628 | || || ||||| ||||| || || ||||||||||| || || || || || || | Sbjct 100 TCAGCGTACGGCCATCCTCAAGCTGCTTACCAGCAAAGATCAGGCGCTGTTGGTCCGGGG 41 Query 140629 GAATTCCTTCTTTATCCTGAATTTTAGCTTTTACATTATC 140668 |||| || || || |||||||| || || || || || || Sbjct 40 GAATGCCCTCCTTGTCCTGAATCTTCGCCTTGACGTTCTC 1 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1515187226878380