Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Malassezia_20furfur_20[genbank_20GCA_5F001265055.1_202015-08-11] 3,460 sequences; 13,865,456 total letters Query= NC_028636.1 Length=135952 Score E Sequences producing significant alignments: (Bits) Value seq1050 118 9e-22 seq3452 98.7 9e-16 >seq1050 Length=2041 Score = 118 bits (130), Expect = 9e-22 Identities = 145/198 (73%), Gaps = 0/198 (0%) Strand=Plus/Minus Query 26987 CATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTC 27046 ||||||| | || ||||| |||||||| || ||| | || || || ||||| || |||| Sbjct 309 CATGCAGGTTTTCGTAAAGACTCTGACAGGAAAGACGATCACACTCGAAGTCGAGTCGTC 250 Query 27047 CGACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCA 27106 |||| |||| |||| ||||| ||| || |||||||| || ||||| || || || || Sbjct 249 CGACACGATCGAGAACGTCAAGGCAAAGATCCAAGACAAGGAGGGCATTCCTCCGGACCA 190 Query 27107 ACAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAA 27166 ||||||| | || | || ||||| || | || || | ||| | ||| ||||| Sbjct 189 ACAGCGTCTGATCTTTGCGGGCAAGCAGCTCGAGGATGGCCGTACCCTGAGCGACTACAA 130 Query 27167 CATTCAAAAGGAGTCGAC 27184 ||| || ||||||||||| Sbjct 129 CATCCAGAAGGAGTCGAC 112 >seq3452 Length=2631 Score = 98.7 bits (108), Expect = 9e-16 Identities = 147/209 (70%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 27009 CTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCCGACTCGATTGAGATGGTCAAA 27068 || || |||||| | ||||| | ||||||||| |||| ||| | ||||| | || || Sbjct 3 CTTACGGGCAAGACGATTACATTGGAAGTGGAATCGTCTGACACCATTGAAAACGTGAAG 62 Query 27069 CAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAACAGCGTTTAATATACGCCGGC 27128 || |||||||| || || ||||| || || || ||||||||| | || | || ||| Sbjct 63 GCGAAGATTCAAGATAAGGAGGGCATTCCTCCGGACCAACAGCGTCTGATCTTTGCGGGC 122 Query 27129 AAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAACATTCAAAAGGAGTCGACCTTA 27188 || || | || || | ||| | ||| |||||||| || ||||||||||| | Sbjct 123 AAGCAGCTTGAGGATGGCCGTACCCTGAGCGACTACAACATCCAGAAGGAGTCGACGCTT 182 Query 27189 CATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217 || ||||| | ||| | || ||||| || Sbjct 183 CACTTGGTCCTCCGTCTTCGTGGTGGTAT 211 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 434899589779200