Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Malassezia_20furfur_20[genbank_20GCA_5F001265055.1_202015-08-11] 3,460 sequences; 13,865,456 total letters Query= NC_029132.1 Length=140122 Score E Sequences producing significant alignments: (Bits) Value seq3022 104 2e-17 >seq3022 Length=6119 Score = 104 bits (114), Expect = 2e-17 Identities = 310/482 (64%), Gaps = 35/482 (7%) Strand=Plus/Plus Query 34393 GGGCGACTTGGGCCCGGTCTACGGGTTCCAGTGGAGACACTTTGGGGCGGAGTATCGGGG 34452 |||||||||||| ||||| ||||| ||||| ||| | |||||||| || |||| || | Sbjct 1401 GGGCGACTTGGGACCGGTGTACGGCTTCCAATGGCGGCACTTTGGCGCCCAGTA-CGTCG 1459 Query 34453 GAG-CGAAGCGGACTATTCGGGACAGGGAGCGGACCAGCTGCAGTACGTGATCGACACCT 34511 | ||| | |||||| |||| ||||| | ||||||||| | || || | Sbjct 1460 ACGCCGACACCGACTATACGGGGCAGGGTGTAGACCAGCTGGCACAGGTCATTCATCAAA 1519 Query 34512 TGAAGCGGAACCCTGATGACAGAAGGATCGTGATGTGCGCGTGGAACCCGAAGGATCTCC 34571 | ||| |||||| |||| | | || ||| | | ||| ||||||||| || || | Sbjct 1520 TCAAGACGAACCCCACTGACCGCCGCATTGTGCTCTCCGCATGGAACCCGCCTGACCTAC 1579 Query 34572 CTCTGATGGCGCTCCCCCCGTGCCACACCCTCTGCCAATTCTACGTC------GCGAA-- 34623 | || ||||| | || || || || | | | |||||||||| ||| |||| Sbjct 1580 CGCTCATGGCATTGCCACCCTGTCATATCTTGTGCCAATTCTTTGTCACCCTGCCGAACC 1639 Query 34624 ---------------TGG----------GGAGCTGTCCTGCCAGCTCTATCAACGATCGG 34658 ||| | |||| || |||||| | || || || ||| Sbjct 1640 CTGAAGAGGCGGCGGTGGGACGCAAGCCGCAGCTCTCATGCCAGATGTACCAGCGCTCGT 1699 Query 34659 GAGACATGGGGTTAGGGGTGCCGTTCAACATTGCTAGTTACGCTCTGCTCACGTACATGA 34718 | || ||||||| || ||||| ||||||||||| ||||| || || ||||| || | | Sbjct 1700 GCGATCTGGGGTTGGGCGTGCCCTTCAACATTGCAAGTTATGCGCTACTCACCCACCTCA 1759 Query 34719 TCGCTCATGTCGTGGGGTTGGTTCCTGGGGAGCTGGTGCATACGTTGGGGGATGCGCATA 34778 |||| ||||| ||| | | | | || | || | |||| || || || Sbjct 1760 TCGCACATGTGACGGGATGCGAAGCGGCCGAATTCACGCTGGCCATGGGTGACGCTCACG 1819 Query 34779 TCTACCTGAACCACATCGAGCGGCTCCGGATCCAGCTGCAACGAGAGCCCCGACCGTTCC 34838 | ||||| ||||| || |||| | | | | |||||| || ||||| ||||| |||| Sbjct 1820 TATACCTCAACCATATTGAGCCGTTGCAGCAGCAGCTGATGCGCGAGCCGCGACCCTTCC 1879 Query 34839 CC 34840 || Sbjct 1880 CC 1881 Score = 104 bits (114), Expect = 2e-17 Identities = 310/482 (64%), Gaps = 35/482 (7%) Strand=Plus/Minus Query 6505 GGGGAACGGTCGGGGCTCTCGTTGCAGCTGGATCCGGAGCCGCTCGATGTGGTTCAGGTA 6564 |||||| ||||| ||||| || |||||| | | | | |||| || ||||| ||||| Sbjct 1881 GGGGAAGGGTCGCGGCTCGCGCATCAGCTGCTGCTGCAACGGCTCAATATGGTTGAGGTA 1822 Query 6565 GATATGCGCATCCCCCAACGTATGCACCAGCTCCCCAGGAACCAACCCCACGACATGAGC 6624 | || || || |||| | || | || | | | | ||| ||||| || Sbjct 1821 TACGTGAGCGTCACCCATGGCCAGCGTGAATTCGGCCGCTTCGCATCCCGTCACATGTGC 1762 Query 6625 GATCATGTACGTGAGCAGAGCGTAACTAGCAATGTTGAACGGCACCCCTAACCCCATGTC 6684 ||| | || ||||| || || ||||| ||||||||||| ||||| || ||||||| || Sbjct 1761 GATGAGGTGGGTGAGTAGCGCATAACTTGCAATGTTGAAGGGCACGCCCAACCCCAGATC 1702 Query 6685 TCCCGATCGTTGATAGAGCTGGCAGGACAGCTCC----------CCA------------- 6721 | ||| || || || | |||||| || |||| | ||| Sbjct 1701 GCACGAGCGCTGGTACATCTGGCATGAGAGCTGCGGCTTGCGTCCCACCGCCGCCTCTTC 1642 Query 6722 ----TTCGC------GACGTAGAATTGGCAGAGGGTGTGGCACGGGGGGAGCGCCATCAG 6771 |||| ||| |||||||||| | | | || || || || | ||||| || Sbjct 1641 AGGGTTCGGCAGGGTGACAAAGAATTGGCACAAGATATGACAGGGTGGCAATGCCATGAG 1582 Query 6772 AGGGAGATCCTTCGGGTTCCACGCGCACATCACGATCCTTCTGTCATCAGGGTTCCGCTT 6831 || || || ||||||||| ||| | | ||| || | | |||| |||||| ||| Sbjct 1581 CGGTAGGTCAGGCGGGTTCCATGCGGAGAGCACAATGCGGCGGTCAGTGGGGTTCGTCTT 1522 Query 6832 CAAGGTGTCGATCACGTACTGCAGCTGGTCCGCTCCCTGTCCCGAATAGTCCGCTTCG-C 6890 | | || || | ||||||||| | ||||| |||| |||||| | ||| | Sbjct 1521 GATTTGATGAATGACCTGTGCCAGCTGGTCTACACCCTGCCCCGTATAGTCGGTGTCGGC 1462 Query 6891 TCCCCCGATACTCCGCCCCAAAGTGTCTCCACTGGAACCCGTAGACCGGGCCCAAGTCGC 6950 | || |||| || |||||||| | ||| ||||| ||||| ||||| |||||||||| Sbjct 1461 GTCGACG-TACTGGGCGCCAAAGTGCCGCCATTGGAAGCCGTACACCGGTCCCAAGTCGC 1403 Query 6951 CC 6952 || Sbjct 1402 CC 1401 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 448243012651200