Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Malassezia_20furfur_20[genbank_20GCA_5F001265055.1_202015-08-11] 3,460 sequences; 13,865,456 total letters Query= NC_030656.1 Length=133492 Score E Sequences producing significant alignments: (Bits) Value seq3271 122 7e-23 >seq3271 Length=3785 Score = 122 bits (134), Expect = 7e-23 Identities = 557/871 (64%), Gaps = 37/871 (4%) Strand=Plus/Plus Query 4281 TCGAAGAAATTAGTTTTGCCTTCTAACGAAATATTTTCCATAAAATCAAACGGATTAGTT 4340 ||||| || || | ||||| | | ||||||||| |||||||| || || || || || Sbjct 226 TCGAAAAAGTTCGACTTGCCCTGCAGCGAAATATTCTCCATAAAGTCGAAGGGGTTCGTC 285 Query 4341 GCGTTGTAATGTTTT---TCACACTTTAGAGCTACAAGCAATCGGTCAGCTACAAATTCT 4397 |||||||| || || | | | || || || |||| ||||| || ||||| || Sbjct 286 GCGTTGTAGTGCTTCGGGTTGCCC---AGCGCCACGAGCAGGCGGTCCGCCACAAACTCA 342 Query 4398 ATATACTGGCTCATGAGTT-CGCAGTTAATTCCAATTAATCTCACAGGTAGCGCGTATGT 4456 || ||||||| ||| || |||| || || ||||| | ||| || ||||||| | Sbjct 343 ATGTACTGGCACATCAGGCGCGCA-TTCATGCCAATCAGCGACACGGGCAGCGCGTCGGA 401 Query 4457 CAAAAACTCTTGTTCTATAGTTACGGCTTCTGTGATTATATCTTTTATTTTATCT---TT 4513 | || ||||| || || | || || || || || || || | | || | Sbjct 402 AAGGAAGTCTTGCTCAATCGCCACCGCCTCGGTAATGATGCGGTTCACCGTGTCGGGGTG 461 Query 4514 AGATGGTTTATTTACTAAGTATCCAAACAATAAACACGCAAAATCACAATGCAAACCTTC 4573 | | || || | || ||||||| | |||||||| || |||| ||| || Sbjct 462 CGCGCGCTTCTTGAG---GTGGCCAAACAGCAGGCACGCAAAGTCGGTGTGCAGACCCTC 518 Query 4574 GTCTCTGCTA-ATCAGTTCGTTAGAAAACGTTAATCCGGGCATTAAACCTCTCTTTTTAA 4632 ||| | || | || || ||||| || |||| | |||||||| | ||| | ||| || | Sbjct 519 GTCAC-GCGAGATGAGCTCGTTCGAGAACGACAGGCCGGGCATCAGACCGCGCTTCTTCA 577 Query 4633 GCCAAAATATAGCGGCAAATGACCCAGAAAAGAATATGCCTTCTACGGCGGCAAACGCTA 4692 |||| || || | |||||| || || || ||||| ||||| || |||||||||||||| | Sbjct 578 GCCAGAAGATCGAGGCAAACGAGCCCGAGAAGAAGATGCCCTCCACGGCGGCAAACGCCA 637 Query 4693 CTAATCGGGACCCGAACGA-GC-TGGCTTTGTCTTTAATCCATTTTAATGCCCAGTTAGC 4750 | | || | |||||| || ||| ||| | ||||| | ||||| | || Sbjct 638 CAAGGCGCTCCGAGAACGACGCACGGC--GGTCGCTGATCCAGCGCAGCGCCCACTCGGC 695 Query 4751 TTTTTTCTTAACGCACGGAATTGTGTATATAGCGTT---AAATAATTTACTTTTTTCAAA 4807 || | ||| || ||| || || | || || || || || | | | || Sbjct 696 CTTCTGCTTCACCACCGGGATCGTCTCAATCGCATTGAACAAAAAGTCGCGCTGCTC--- 752 Query 4808 TGGGTCTTGAATATAAGTGTCTATTAGTAGGCTATACATTTCAGAATGTATATTTTCTAT 4867 || || | || || ||||| || || || || | || || || || || || || Sbjct 753 CGGCTCGCGGATGTACGTGTCAATGAGCAGCGAGTAGGTCTCCGAGTGGATGTTCTCAAT 812 Query 4868 AGCAATCTGAAATCCGTAAAAGCATCTAGCTTCTGTTACTTGAACTTCGTTACAAAATCT 4927 ||||| || ||||||||||| | || || | | || || ||| | ||| | Sbjct 813 CATGATCTGGAAACCGTAAAAGCAGCGCGCCTCGGCGGCCTGCACCTCGGAGCTAAAGCG 872 Query 4928 TTCTACTAAGTTTTCGTTTACTATACCGTCACTGGCTGCAAAAAACGCCAAAACATGAGA 4987 ||| | | ||| ||||| || || ||||| || ||||| ||||| | || || Sbjct 873 TTCCAAAAGGTTCTCGTTGACAATCCCGTCCGATGCCGCAAAGAACGCAAGGACGTGGCT 932 Query 4988 TATAAAGTACTGTTCG-------TCAGGCTTAAGTTTTTTCCAGTGGGGCAAATCTTTAG 5040 ||||||| | ||| |||||| | || | ||||| | ||| || || | Sbjct 933 AATAAAGTGGCGCTCGTTGTCGTTCAGGC----GGTTGTCCCAGTCGTGCAGGTCCTTGG 988 Query 5041 TTAAATCAACTTCTTCAACAGTCCAAAACGACGCTTCCGCTTTTTTGTACATAGACCAAA 5100 | |||| || || | ||||| |||||||| || || || |||||||| ||||| Sbjct 989 ACAGGTCAATCTCCTCGGCGGTCCAGAACGACGCCTCGGCCTTCTTGTACATTTGCCAAA 1048 Query 5101 TATCAGGATACTGAATCGGAAGTATGACAAA 5131 | || | || | || |||| | |||||| Sbjct 1049 TCTCGTGGTAGCGGATGGGAAACAGGACAAA 1079 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 427031591852180