Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Malassezia_20furfur_20[genbank_20GCA_5F001265055.1_202015-08-11] 3,460 sequences; 13,865,456 total letters Query= NC_030842.1 Length=115510 Score E Sequences producing significant alignments: (Bits) Value seq3014 91.5 1e-13 seq3022 82.4 6e-11 >seq3014 Length=6189 Score = 91.5 bits (100), Expect = 1e-13 Identities = 149/215 (69%), Gaps = 0/215 (0%) Strand=Plus/Plus Query 27102 TGTGGGAAAGGGTCTGGGCTCCCTCTCGAGCTGAGTCTTCAGCGGTTCCACGTGATCCAG 27161 |||||| |||| | ||||| | | ||||| || |||||| || | || || || Sbjct 4302 TGTGGGGAAGGCCCGAGGCTCGCGCATCAGCTGCTGCTGCAGCGGCTCGATATGGTCGAG 4361 Query 27162 GTAGACGTGAGCGTCTCCCAGGGTGTGGACAAACTCTCCCGGTTCTAGCCCGGTGACGTG 27221 ||| ||||||||||| |||| || | || || ||| || || |||||||| Sbjct 4362 GTACACGTGAGCGTCACCCATGGCCAGCGTGAATTCGGCCGCCTCACATCCCGTGACGTG 4421 Query 27222 AGCCATCATGTACGTGAGGAGAGAGTAGCTGGCGATGTTAAAGGGTACCCCGAGCCCCAT 27281 || || | || ||||| || | |||||| || ||||| ||||| || || | |||| Sbjct 4422 CGCAATGAGGTGGGTGAGTAGCGCGTAGCTCGCAATGTTGAAGGGCACGCCCAAGCCCAG 4481 Query 27282 GTCCCCCGACCTCTGGTAGAGCTGACACGAGAGCT 27316 || | ||| | |||||| | ||| |||||||||| Sbjct 4482 ATCGCACGAGCGCTGGTACATCTGGCACGAGAGCT 4516 >seq3022 Length=6119 Score = 82.4 bits (90), Expect = 6e-11 Identities = 158/232 (68%), Gaps = 1/232 (0%) Strand=Plus/Minus Query 27086 TCCTGTTTA-TCCTCAGTGTGGGAAAGGGTCTGGGCTCCCTCTCGAGCTGAGTCTTCAGC 27144 ||| ||||| || | | |||||| ||||||| ||||| | | ||||| || || | Sbjct 1901 TCCCGTTTAATCTTAATTGTGGGGAAGGGTCGCGGCTCGCGCATCAGCTGCTGCTGCAAC 1842 Query 27145 GGTTCCACGTGATCCAGGTAGACGTGAGCGTCTCCCAGGGTGTGGACAAACTCTCCCGGT 27204 || || | || | ||||| ||||||||||| |||| || | || || ||| | Sbjct 1841 GGCTCAATATGGTTGAGGTATACGTGAGCGTCACCCATGGCCAGCGTGAATTCGGCCGCT 1782 Query 27205 TCTAGCCCGGTGACGTGAGCCATCATGTACGTGAGGAGAGAGTAGCTGGCGATGTTAAAG 27264 || || || || || || || | || ||||| || | || || || ||||| ||| Sbjct 1781 TCGCATCCCGTCACATGTGCGATGAGGTGGGTGAGTAGCGCATAACTTGCAATGTTGAAG 1722 Query 27265 GGTACCCCGAGCCCCATGTCCCCCGACCTCTGGTAGAGCTGACACGAGAGCT 27316 || || || | ||||| || | ||| | |||||| | ||| || ||||||| Sbjct 1721 GGCACGCCCAACCCCAGATCGCACGAGCGCTGGTACATCTGGCATGAGAGCT 1670 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 369491618343260