Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Malassezia_20furfur_20[genbank_20GCA_5F001265055.1_202015-08-11] 3,460 sequences; 13,865,456 total letters Query= NC_032255.1 Length=112536 Score E Sequences producing significant alignments: (Bits) Value seq3388 131 1e-25 seq3452 122 6e-23 seq1050 113 3e-20 seq1153 102 6e-17 seq884 91.5 1e-13 seq975 87.8 1e-12 >seq3388 Length=2974 Score = 131 bits (144), Expect = 1e-25 Identities = 158/213 (74%), Gaps = 4/213 (2%) Strand=Plus/Plus Query 44128 CACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTC 44187 ||||||||| ||||| |||||| ||||||||||| ||| ||| ||| |||| || Sbjct 506 CACCAGGTGGAGCGTCGACTCCTTCTGGATGTTGTAGTCGCTGAGCGTGCGGCCGTCCTC 565 Query 44188 CAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGT 44247 |||||||| || |||||||| | |||||||| || | || | ||| ||||| ||| Sbjct 566 GAGCTGCTTGCCCGCAAAGATGAGCCGCTGCTGGTCCGGGGGGATACCCTCCTTGTCCTG 625 Query 44248 TATCTTCTGCTT--CAATGTTCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTC 44305 | ||| ||| | | || | || |||||| || || ||||| | ||| |||||| Sbjct 626 GACCTTGGACTTGACGACGT--CGATCGTGTCGCTCGACTCGACCTCGAGCGTGATCGTC 683 Query 44306 TTTCCCGTGAGGGTCTTCACGAAGATTTGCATG 44338 || |||||||| ||||| | ||||||||||||| Sbjct 684 TTGCCCGTGAGCGTCTTGATGAAGATTTGCATG 716 >seq3452 Length=2631 Score = 122 bits (134), Expect = 6e-23 Identities = 141/190 (74%), Gaps = 0/190 (0%) Strand=Plus/Minus Query 44129 ACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTCC 44188 |||| ||||||||| |||||| ||||||||||| ||| || || | || || Sbjct 190 ACCAAGTGAAGCGTCGACTCCTTCTGGATGTTGTAGTCGCTCAGGGTACGGCCATCCTCA 131 Query 44189 AGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGTT 44248 |||||||| || |||||||||| |||||| || || | ||| | || ||||| || Sbjct 130 AGCTGCTTGCCCGCAAAGATCAGACGCTGTTGGTCCGGAGGAATGCCCTCCTTATCTTGA 71 Query 44249 ATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCTTT 44308 |||||| ||||| || | |||||||| | |||||||| |||| ||||||||||| Sbjct 70 ATCTTCGCCTTCACGTTTTCAATGGTGTCAGACGATTCCACTTCCAATGTAATCGTCTTG 11 Query 44309 CCCGTGAGGG 44318 ||||| |||| Sbjct 10 CCCGTAAGGG 1 Score = 93.3 bits (102), Expect = 3e-14 Identities = 96/126 (76%), Gaps = 0/126 (0%) Strand=Plus/Minus Query 44129 ACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTCC 44188 || ||||||||||| |||||| ||||||||||| ||| || ||| |||| ||| Sbjct 418 ACGAGGTGAAGCGTCGACTCCTTCTGGATGTTGTAGTCGCTCAGAGTACGCCCGTCTTCC 359 Query 44189 AGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGTT 44248 || ||||| ||||| ||||||| ||||| || |||| ||| | ||| ||||| ||| Sbjct 358 AGTTGCTTACCGGCGAAGATCAGGCGCTGTTGGTCTGGAGGAATACCCTCCTTGTCCTGA 299 Query 44249 ATCTTC 44254 |||||| Sbjct 298 ATCTTC 293 >seq1050 Length=2041 Score = 113 bits (124), Expect = 3e-20 Identities = 157/216 (73%), Gaps = 3/216 (1%) Strand=Plus/Plus Query 44129 ACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTCC 44188 || ||||||||||| |||||| ||||||||||| ||| || || | || || Sbjct 100 ACGAGGTGAAGCGTCGACTCCTTCTGGATGTTGTAGTCGCTCAGGGTACGGCCATCCTCG 159 Query 44189 AGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGTT 44248 |||||||| || |||||||||| |||||| || || | ||| | || ||||| || Sbjct 160 AGCTGCTTGCCCGCAAAGATCAGACGCTGTTGGTCCGGAGGAATGCCCTCCTTGTCTTGG 219 Query 44249 ATCTTCTGCTTCAATGTTC-CTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCTT 44307 ||||| ||| | | |||| | || ||||||| || || || || | || |||||||| Sbjct 220 ATCTT-TGCCTTGACGTTCTCGATCGTGTCGGACGACTCGACTTCGAGTGTGATCGTCTT 278 Query 44308 TCCCGTGAGGGTCTTCACGAAGATTTGCATGATGTG 44343 ||| || || ||||| ||||| | |||||| |||| Sbjct 279 TCCTGTCAGAGTCTTTACGAAAACCTGCATG-TGTG 313 >seq1153 Length=1838 Score = 102 bits (112), Expect = 6e-17 Identities = 119/158 (75%), Gaps = 2/158 (1%) Strand=Plus/Plus Query 44183 TCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTT 44242 || || |||||||| || |||||||| | |||||||| || | || | ||| ||||| Sbjct 28 TCCTCAAGCTGCTTGCCAGCAAAGATAAGGCGCTGCTGGTCCGGGGGAATACCCTCCTTG 87 Query 44243 TCCGTTATCTTCTGCTTCAATGTTC-CTATGGTGTCGGCGGATTCCACCTCCACCGTAAT 44301 ||| ||||| ||| | |||| | || ||||| | ||| || ||||| | |||||| Sbjct 88 TCCTGGATCTTGGCCTTGAC-GTTCTCGATCGTGTCCGAGGACTCGACCTCGAGCGTAAT 146 Query 44302 CGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCATGA 44339 ||||||||| || |||||||| ||||| | ||||||| Sbjct 147 CGTCTTTCCTGTCAGGGTCTTAACGAAAACCTGCATGA 184 >seq884 Length=2618 Score = 91.5 bits (100), Expect = 1e-13 Identities = 106/143 (74%), Gaps = 0/143 (0%) Strand=Plus/Plus Query 44111 CCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCG 44170 || || | ||| | ||| || ||||| ||||| |||||| ||||||||||| ||| Sbjct 2288 CCGCCGCGCAGGCGCAAAACGAGGTGCAGCGTAGACTCCTTCTGGATGTTGTAGTCGCTC 2347 Query 44171 AGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGC 44230 || |||| |||| || |||||||| ||||||||||| | ||||||||||| | || Sbjct 2348 AGCGTGCGCCCGTCCTCGAGCTGCTTGCCGGCAAAGATGAGGCGCTGCTGATCGGGCGGA 2407 Query 44231 ACACCTTCCTTTTCCGTTATCTT 44253 | || ||||| ||| ||||| Sbjct 2408 ATGCCCTCCTTGTCCTGGATCTT 2430 >seq975 Length=2222 Score = 87.8 bits (96), Expect = 1e-12 Identities = 105/143 (73%), Gaps = 0/143 (0%) Strand=Plus/Minus Query 44111 CCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCG 44170 || || | ||| | || || ||||| ||||| |||||| ||||||||||| ||| Sbjct 443 CCGCCGCGCAGGCGCAGGACGAGGTGCAGCGTCGACTCCTTCTGGATGTTGTAGTCGCTC 384 Query 44171 AGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGC 44230 || |||| |||| || |||||||| ||||||||||| | ||||||||| || | || Sbjct 383 AGCGTGCGCCCGTCCTCGAGCTGCTTGCCGGCAAAGATGAGACGCTGCTGGTCCGGCGGG 324 Query 44231 ACACCTTCCTTTTCCGTTATCTT 44253 | || ||||| ||| ||||| Sbjct 323 ATGCCCTCCTTATCCTGGATCTT 301 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 359975219654820