Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Malassezia_20furfur_20[genbank_20GCA_5F001265055.1_202015-08-11] 3,460 sequences; 13,865,456 total letters Query= NC_033775.1 Length=376207 Score E Sequences producing significant alignments: (Bits) Value seq1050 143 6e-29 seq1153 132 1e-25 seq3388 113 1e-19 seq3452 95.1 3e-14 seq975 86.0 2e-11 >seq1050 Length=2041 Score = 143 bits (158), Expect = 6e-29 Identities = 153/202 (76%), Gaps = 0/202 (0%) Strand=Plus/Minus Query 177928 TTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGACACCA 177987 ||||||| || ||||| |||||||| |||||||| ||||| || || || ||||| | Sbjct 301 TTTTCGTAAAGACTCTGACAGGAAAGACGATCACACTCGAAGTCGAGTCGTCCGACACGA 242 Query 177988 TCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAACGAC 178047 ||||||||||||| |||||| || ||||| || || || ||||||||||| || || | Sbjct 241 TCGAGAACGTCAAGGCAAAGATCCAAGACAAGGAGGGCATTCCTCCGGACCAACAGCGTC 182 Query 178048 TTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTCCAAA 178107 | ||||| || || || |||||||| ||||| | || || ||| || ||| |||| | Sbjct 181 TGATCTTTGCGGGCAAGCAGCTCGAGGATGGCCGTACCCTGAGCGACTACAACATCCAGA 122 Query 178108 AAGAATCAACACTGCATCTTGT 178129 | || || || || || || || Sbjct 121 AGGAGTCGACGCTTCACCTCGT 100 >seq1153 Length=1838 Score = 132 bits (146), Expect = 1e-25 Identities = 120/151 (79%), Gaps = 0/151 (0%) Strand=Plus/Minus Query 177928 TTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGACACCA 177987 ||||||| || || || |||||||| ||||| || |||||||| || ||| ||||| | Sbjct 175 TTTTCGTTAAGACCCTGACAGGAAAGACGATTACGCTCGAGGTCGAGTCCTCGGACACGA 116 Query 177988 TCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAACGAC 178047 ||||||||||||| ||||| |||||||| || || || || ||||||||||| || | Sbjct 115 TCGAGAACGTCAAGGCCAAGATCCAGGACAAGGAGGGTATTCCCCCGGACCAGCAGCGCC 56 Query 178048 TTATCTTCGCCGGAAAACAGCTCGAAGATGG 178078 ||||||| || || || ||||| || ||||| Sbjct 55 TTATCTTTGCTGGCAAGCAGCTTGAGGATGG 25 >seq3388 Length=2974 Score = 113 bits (124), Expect = 1e-19 Identities = 151/209 (72%), Gaps = 6/209 (3%) Strand=Plus/Minus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAA---AGCTCA 177980 ||||| ||| | || || ||||| || || |||||||| |||||||| || ||| Sbjct 712 CAAATCTTCATCAAGACGCTCACGGGCAAGACGATCACGCTCGAGGTCGAGTCGAGC--- 656 Query 177981 GACACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAG 178040 ||||| ||||| |||||| ||| | |||||||| || || ||||| ||||||||| Sbjct 655 GACACGATCGACGTCGTCAAGTCCAAGGTCCAGGACAAGGAGGGTATCCCCCCGGACCAG 596 Query 178041 CAACGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAAC 178100 || || || ||||| || || || |||||||| || || | || || ||| || ||| Sbjct 595 CAGCGGCTCATCTTTGCGGGCAAGCAGCTCGAGGACGGCCGCACGCTCAGCGACTACAAC 536 Query 178101 GTCCAAAAAGAATCAACACTGCATCTTGT 178129 |||| || || || || || || || || Sbjct 535 ATCCAGAAGGAGTCGACGCTCCACCTGGT 507 >seq3452 Length=2631 Score = 95.1 bits (104), Expect = 3e-14 Identities = 134/187 (72%), Gaps = 1/187 (1%) Strand=Plus/Plus Query 177942 CTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGACACCATCGAGAACGTCAAA 178001 || || || || ||||| || | || |||||| || |||||||| || ||||| || Sbjct 3 CTTACGGGCAAGACGATTACATTGGAAGTGGAATCGTCTGACACCATTGAAAACGTGAAG 62 Query 178002 CAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAACGACTTATCTTCGCCGGA 178061 |||||||| || || || || || ||||||||||| || || || ||||| || || Sbjct 63 GCGAAGATTCAAGATAAGGAGGGCATTCCTCCGGACCAACAGCGTCTGATCTTTGCGGGC 122 Query 178062 AAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTCCAAAAAGAATCAACACTG 178121 || ||||| || ||||| | || || ||| || ||| |||| || || || || || Sbjct 123 AAGCAGCTTGAGGATGGCCGTACCCTGAGCGACTACAACATCCAGAAGGAGTCGACGCTT 182 Query 178122 CATCTTG 178128 || |||| Sbjct 183 CA-CTTG 188 Score = 86.0 bits (94), Expect = 2e-11 Identities = 94/125 (75%), Gaps = 0/125 (0%) Strand=Plus/Plus Query 178005 AAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAACGACTTATCTTCGCCGGAAAA 178064 |||||||||||||| || || || ||||| ||||| || || || ||||||||||| || Sbjct 294 AAGATTCAGGACAAGGAGGGTATTCCTCCAGACCAACAGCGCCTGATCTTCGCCGGTAAG 353 Query 178065 CAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTCCAAAAAGAATCAACACTGCAT 178124 || || ||||| || | ||||| ||| || ||| |||| || || || || || || Sbjct 354 CAACTGGAAGACGGGCGTACTCTGAGCGACTACAACATCCAGAAGGAGTCGACGCTTCAC 413 Query 178125 CTTGT 178129 || || Sbjct 414 CTCGT 418 >seq975 Length=2222 Score = 86.0 bits (94), Expect = 2e-11 Identities = 94/125 (75%), Gaps = 0/125 (0%) Strand=Plus/Plus Query 178005 AAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAACGACTTATCTTCGCCGGAAAA 178064 ||||| ||||| || || || ||||| ||||||||||| || || ||||| ||||| || Sbjct 301 AAGATCCAGGATAAGGAGGGCATCCCGCCGGACCAGCAGCGTCTCATCTTTGCCGGCAAG 360 Query 178065 CAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTCCAAAAAGAATCAACACTGCAT 178124 |||||||| || || | || || ||| || ||| |||| || || || || ||||| Sbjct 361 CAGCTCGAGGACGGGCGCACGCTGAGCGACTACAACATCCAGAAGGAGTCGACGCTGCAC 420 Query 178125 CTTGT 178129 || || Sbjct 421 CTCGT 425 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1203677837091240