Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Malassezia_20furfur_20[genbank_20GCA_5F001265065.1_202015-08-11] 2,092 sequences; 7,790,619 total letters Query= NC_000852.5 Length=330611 Score E Sequences producing significant alignments: (Bits) Value seq1557 116 8e-21 seq1672 111 3e-19 >seq1557 Length=2964 Score = 116 bits (128), Expect = 8e-21 Identities = 253/368 (69%), Gaps = 13/368 (4%) Strand=Plus/Minus Query 230239 ATCTTTTGGCTGCGGAACAAAGGTGTGATGCCTGGCCTCGGTCTGTCT--AACGAGTTCA 230296 ||||| |||||| ||| ||| ||||||| ||||| ||| ||| |||||| ||| Sbjct 581 ATCTTCTGGCTGAAGAAGCGCGGTCTGATGCCCGGCCT--GTCGTTCTCGAACGAGCTCA 524 Query 230297 TCAGTCGCGACGAGGGTCTCCATCAACAGTTCGGCGAGCTTA-TGTATTCAAAGCTCCAG 230355 || || ||||||||||| || | || ||| || | ||| | | ||| || Sbjct 523 TCTCGCGTGACGAGGGTCTGCACCCGACTTT--GCGTGCCTGCTGTTTGGCCACCTCAAG 466 Query 230356 AA-CAAGCT-ACCATTCGAGACGGTCAAACAAATCATTACAGAAGCAGTTGAAAACGAAA 230413 || | || ||| ||| ||||| || | |||||||| || || || | | ||| Sbjct 465 AAGCGCGCGCACCC--CGACACGGTGAACCGCATCATTACCGAGGCGGTGGCGATCGAGC 408 Query 230414 AGGAGTTCATTTGTGACGCTATTCCA-TGTCGCCTTATTGGCATGAACGCTGAACTTATG 230472 | || ||| ||| ||||| | || |||||| | |||||||||||||| || ||| Sbjct 407 AAGACTTCCTTTCCGACGCGCTGCCCGTGTCGC-TGATTGGCATGAACGCGCGCCTGATG 349 Query 230473 GGACAGTACATCGAATTCGTAGCCGACCGCATTTTTGTTGCACTTGGTTACGAGAAAGTG 230532 | |||||||| || || || || |||||| | | || || || || || ||| Sbjct 348 TGCCAGTACATTGAGTTTGTGGCGGACCGCCTGCTCGTGGCGCTGGGCAACCCGAAGCAC 289 Query 230533 TACAACTCTAAGAACCCCTTTGCATTTATGGAGCTCATTTCGCTTCAAGGGAAGACCAAC 230592 |||||| | | ||||||||| | ||||||||| ||||||||| || || ||| | ||| Sbjct 288 TACAACGCGACGAACCCCTTCGACTTTATGGAGAACATTTCGCTGCAGGGCAAGTCGAAC 229 Query 230593 TTCTTCGA 230600 || ||||| Sbjct 228 TTTTTCGA 221 >seq1672 Length=24606 Score = 111 bits (122), Expect = 3e-19 Identities = 405/630 (64%), Gaps = 12/630 (2%) Strand=Plus/Minus Query 319401 CTTCACGAACTCGGACAGATTTCCCTTGTACTTCTTCAGCTTTAGGTTAGGTTCGTAATG 319460 |||||||||| || ||| || ||| ||| ||| | ||| | | ||||| || Sbjct 23079 CTTCACGAACGCGTCCAGGTTGCCCGGGTAACGCTTGATCTTGAAGC--GGTTCAGG-TG 23023 Query 319461 GATAATAGAGGTGCAAACAGCGTCGAGGAACCCGGAGTCGTGTGACACAATCACGCACGA 319520 || ||| ||| || || ||| |||||| ||||||||| |||||||| | ||| Sbjct 23022 GAGAATGTCGGTACACACGTCGTTCAGGAACTTGGAGTCGTGCGACACAATGATCGACGT 22963 Query 319521 AACGTCCTTAAGGTTGATCAGGTATTCAATCAACCACCTCACGTTAGACACAGAAAGATG 319580 || | ||| || | ||||| || | | |||| | ||||| || | || Sbjct 22962 GGTCTCGGTGAGGCTGTTGAGGTAGTCGGTGATCCACTTGACGTTGATGACGTCCAAGTG 22903 Query 319581 GTTGGTCGGCTCGTCAAGAAGCAGTAGCTTTGCGTTCAGGAGCATTGCACGTGCAAGAGC 319640 ||| ||||||||||| || ||||| | | || || | |||| ||||| || || || Sbjct 22902 GTTCGTCGGCTCGTCGAGCAGCAGAATGTCGGCCTTGAACAGCACGGCACGCGCCAGGGC 22843 Query 319641 GAGTTTCATTTTCCACCCTCCGGAAAGAGTGTTAATTGGGGCAGATTGGCGCTCAATATC 319700 ||| ||||| ||||| || || || || | | || ||| ||| ||||||| || Sbjct 22842 GAGCTTCATCTTCCAGCCACCCGAGAGCGCCGTGATGGGGCCAGCCTGGCGCTGCTCGTC 22783 Query 319701 AAAGCCAACCGATTCTAGAGTAGTTACGATCTTTTCACGAGACCAAATGTTTTCCTTTAC 319760 ||||| | | | || ||| || |||| | | | || | || | Sbjct 22782 GAAGCCCATC--TCCTTGAG------CG-TCTTGGCCGCCGTCTCGTGGTCGACGTTCAG 22732 Query 319761 TTGTTCATCATTGGCAATGAAGTCAATGATAGCCGTGTTAGAATCGGACCCGTCGAGATC 319820 | | || | | |||||||| | || | ||| | || || |||||||| || Sbjct 22731 GCGCTTGTCGGCGACGATGAAGTCGAGAATGGAGATGTCACCCTCCGAGCCGTCGAGGTC 22672 Query 319821 GTGTTCCACGTAAGCAGTTTTCAAAACATCCGCAGAGGGGAACCCTTCAAGCTGGCCGTT 319880 ||| || ||||| || || | || | |||||||| || || | ||||||||| Sbjct 22671 GTGCTCGACGTACCAGGTGCGCACCTCGTCGGGCGAGGGGAAGCCCTCGACCTGGCCGTT 22612 Query 319881 CACAATAGCGCGCATCAGGGTTGATTTACCCGCCCCGTTTGGCCCACACAGACCGTAGCG 319940 | || ||||||||||| || || || |||| ||||| | ||||||||||||||||| Sbjct 22611 CTGGATGGCGCGCATCAGCGTCGACTTGCCCGAACCGTTGCGGCCACACAGACCGTAGCG 22552 Query 319941 GTTTCCGCGTTTCAGGTTGAACCGCGTGTTGTTCAGAAGAATTTTTCCACCATATGCCAG 320000 || || || || ||| | | || |||| || ||||| || |||| || || || Sbjct 22551 GTGGCCACGCTTGAGGCGCAGCGTCGCCGTGTTGAGCAGAATCTTGGCACCGTAGGCGAG 22492 Query 320001 AGAAAATTCACAATCACACAGATCCTCACC 320030 || || | || | ||||| || |||| Sbjct 22491 CGAGAACTGGCAGTTGCACAGGTCGACACC 22462 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1057795646349960