Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Malassezia_20furfur_20[genbank_20GCA_5F001265065.1_202015-08-11] 2,092 sequences; 7,790,619 total letters Query= NC_002687.1 Length=335593 Score E Sequences producing significant alignments: (Bits) Value seq1375 161 2e-34 seq1976 113 1e-19 >seq1375 Length=5294 Score = 161 bits (178), Expect = 2e-34 Identities = 440/669 (66%), Gaps = 15/669 (2%) Strand=Plus/Plus Query 248833 TTCAAAACGCTGGAGAAATCGTATCTCCTCAAAATTGATGGCAAGATCGTGGAACGAATT 248892 ||||| ||||| ||| ||||| || || || | |||||| ||| || || Sbjct 995 TTCAAGACGCTTGAGCGCTCGTACCTGCTGCGCATCAACGGCAAGGTCGCCGAGCGCCCC 1054 Query 248893 CAGCACATGTTGATGCGAGTGGCTGTCGGGATTCACAAGGATGACATAGAGAGCGTGCTC 248952 ||||||||| | ||||| ||||| || || || ||| ||| | ||||||| | || Sbjct 1055 CAGCACATGCTCATGCGTGTGGCGGTGGGCATCCACGGCACCGACGTCGAGAGCGCGATC 1114 Query 248953 GAGACGTACACCGGAATGA--GTGAACGCTGGATGACACATGCCACACCGACGCTCTTCA 249010 |||||||||| | ||| | ||| || | || || ||| | ||||||||||||| Sbjct 1115 GAGACGTACAACATGATGTCGGAGAAGGCCT--TTACGCACGCCTCGCCGACGCTCTTCA 1172 Query 249011 ACGCCGGTACCGTCAACAATCAGCTGAGCTCGTGCTTTCTTCTTGCCATGCAAGACGACT 249070 |||| || || | | ||| || |||||||| || | |||| | ||||||| Sbjct 1173 ACGCGGGCACGCCGAGCCCGCAGATGTCGTCGTGCTTCCTGGTGTGCATGAAGGACGACT 1232 Query 249071 CTGTCGACGGCATTTATGACACGCTTAAACAGACGGCGAAGATTTCTAAATTCGCGGGCG 249130 | |||| ||||| || |||||||| || | |||| ||| || || ||||||| Sbjct 1233 CGATCGAGGGCATCTACGACACGCTCAAGTCGTGTGCGATGATCTCCAAGACGGCGGGCG 1292 Query 249131 GAATCGGTCTCTCCGTCTCCAACATCCGAGCGAAGGGTTCGTACATCAAAGGTACAAATG 249190 | || |||||| | || | |||||| | | ||| |||||||| || || || | Sbjct 1293 GCATTGGTCTCAACATCCACTGCATCCGCGGCACGGGCTCGTACATTGCCGGCACGAACG 1352 Query 249191 GGGTCAGTGATGGTATCGTACCCCTCCTTCGATGCTTTGAGTCCACCGCCAGGTTCATCA 249250 | || || | || || || ||| | || || | | ||| || | | | || Sbjct 1353 GTGTGAGCAACGGCATTGTGCCCATGCTCCGCGTGTACAACAACACGGCGCGCTACGTCG 1412 Query 249251 ACCAGGCCGG------GCGCCGAAAGGGGTCGTTCGCCATGTATTTGGAAGTGTGGCACG 249304 |||||| || ||||| || | || ||||| || | || ||||||| Sbjct 1413 ACCAGGGTGGCAACAAGCGCC---CCGGCGCCTTTGCCATCTACCTCGAGCCGTGGCACT 1469 Query 249305 CCGATATATTGGAGTTCCTGGACTTGAAAAAGAACAACGGCAACGAGCTCATGAGAGCGC 249364 | || | || ||||| | ||| || |||||| ||||||| || || | |||| Sbjct 1470 CGGACGTGTTTGAGTTTATCGACCTGCGCAAGAACCACGGCAAGGAAGAGGTGCGCGCGC 1529 Query 249365 GTGACCTCTTCTACGGCCTGTGGGTCTCCGACTTGTTCATGCGCCGCGTCAAGGCCGACG 249424 | ||||| ||||||| |||||||| | ||| |||| |||||||| ||| || | || Sbjct 1530 GCGACCTGTTCTACGCGCTGTGGGTGCCGGACCTGTTTATGCGCCGTGTCGAGCAGGGCG 1589 Query 249425 GCGATTGGACGCTTCTTTCTCCGTCCGACGCCCCGGACCTCATCGATCTAC-ACGGCGCC 249483 |||| |||||||| | | || |||| || || | |||| ||| || | |||||| Sbjct 1590 GCGACTGGACGCTGATGTGCCCCGCCGAGGCGCCCGGCCTCGCCGA-CTGCTACGGCGAG 1648 Query 249484 GACTTCGAC 249492 || || ||| Sbjct 1649 GAGTTTGAC 1657 >seq1976 Length=1342 Score = 113 bits (124), Expect = 1e-19 Identities = 189/266 (71%), Gaps = 8/266 (3%) Strand=Plus/Minus Query 254011 TGCTTTTCCACGGTCCTCCCGGAACAGGCAAGACGTCAACCATCCTGGCGCTGGCCCGAA 254070 |||| ||| |||| || ||||| || ||||||||||| || ||| ||||||| || || Sbjct 1121 TGCTGTTCTACGGCCCGCCCGGCACGGGCAAGACGTCGACGATCATGGCGCTCGCGCGCC 1062 Query 254071 CCCTGTTGGGCGAGGGGAACATGAGAGAGCGCGTGCTCGAGCTGAACGCTTCTGACGAAC 254130 |||| ||| || | || || | | |||||||||||||||||| || ||||| | Sbjct 1061 GGCTGTACGGCAAGCAGTTCAAGA---ACCACGTGCTCGAGCTGAACGCGTCCGACGACC 1005 Query 254131 GCGGGTTGGACGTCGTCCGCGACAAGATCAAGACTTTCTCCAAGATGTCGATTTCGTCGT 254190 |||| | |||||||| |||| |||||||| | ||| | | | | || ||| || Sbjct 1004 GCGGCATCGACGTCGTGCGCGGGCAGATCAAGTCGTTCGCGAGCACG-CG-CAACGT-GT 948 Query 254191 TC-CAACCCGGCTGTCCGCCTTTCAAGCTCGTGATCCTGGACGAGGCGGACACCATGACG 254249 || || | || | | | |||||||| | | || |||||||| ||| |||||||| Sbjct 947 TCAGCACGCAGCAGGAC-ACGTTCAAGCTGATCGTGCTCGACGAGGCCGACGCCATGACG 889 Query 254250 GCCGACGCGCAGTCCGCCCTCCGCCG 254275 | ||||||| |||| ||||| || Sbjct 888 CAGGCCGCGCAGGCCGCGCTCCGGCG 863 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1073737619033856