Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Malassezia_20furfur_20[genbank_20GCA_5F001265065.1_202015-08-11] 2,092 sequences; 7,790,619 total letters Query= NC_003310.1 Length=196858 Score E Sequences producing significant alignments: (Bits) Value seq1557 104 3e-17 >seq1557 Length=2964 Score = 104 bits (114), Expect = 3e-17 Identities = 389/603 (65%), Gaps = 19/603 (3%) Strand=Plus/Plus Query 33572 AAACATCAAACATGCGAAATCGCAGTGCAGACCCTCGTCTCTACTAATTAATTCGTTAGA 33631 ||||| || || || || ||| ||||||||||||||| | || | ||||| || Sbjct 478 AAACAGCAGGCACGCAAAGTCGG-GTGCAGACCCTCGTCACGCGAGATGAGCTCGTTCGA 536 Query 33632 AAACGTGAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGAAGCGAATGATCC 33691 |||| || |||||||| || || ||||| || ||||| || || || || || || || Sbjct 537 GAACGACAGGCCGGGCATCAGACCGCGCTTCTTCAGCCAGAAGATCGAGGCAAACGAGCC 596 Query 33692 GGAAAAGAAGATTCCTTCTACTGCAGCAAAGGCAATAAGTCTCTCTCCATAAC------C 33745 || |||||||| || || || || ||||| || | ||| | ||| | | ||| | Sbjct 597 CGAGAAGAAGATGCCCTCCACGGCGGCAAACGCCACAAGGCGCTC-CGAGAACGACGCAC 655 Query 33746 GGCGCTGTCATGTATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATCGT 33805 |||| ||| ||||| | ||||| |||||||||| || || || ||||| Sbjct 656 GGCG--GTCGCTGATCCAGCGCAGCGCCCACTCGGCCTTCTGCTTCACCACCGGGATCGT 713 Query 33806 TTCTATGGCATTAAAGAGATAGtttttttCATTACTATCTTTAACATAAGTATCGATCAA 33865 || || ||||| || | | ||| | | || | || || || || | Sbjct 714 CTCGATCGCATTGAACAAAAAGTCGCGCTGCTCCGGCTCGCGGATGTACGTGTCAATGAG 773 Query 33866 AAGACTATACATTTCCGAATGAATGTTTTCAATGGCCATCTGAAATCCGTAGAAACATCT 33925 || || | ||||| || ||||| ||||| ||||| || |||||||| || | Sbjct 774 CAGCGAGTAGGTCTCCGAGTGGATGTTCTCAATCATGATCTGGAAACCGTAGAAGCAGCG 833 Query 33926 AGCCTCGGTAATCTGCACTTCTGTACAAAATCGTTCTGCTAAA--TTTTCATTCACTATT 33983 ||||||| |||||| || | | ||| ||||| | ||| || || || || || Sbjct 834 CGCCTCGGCGGCCTGCACCTCGGAGCTAAAGCGTTC--CAAAAGGTTCTCGTTGACAATC 891 Query 33984 CCATCACTGGCTGCAAAAAACGCCAATACATGTTTTATAAAATATTTTTCGTCTGGTGTT 34043 || || || ||||| ||||| | || || | ||||| | |||| || ||| Sbjct 892 CCGTCCGACGCCGCAAAGAACGCAAGGACGTGGCTGATAAAGTGGCGCTCGT-TGTCGTT 950 Query 34044 ----AGTTTATTCCAATCATTGATATCTTTAGATATATCCACTTCTTCCACTGTCCAAAA 34099 | || | ||| || | | || || || | || | || || | ||||| || Sbjct 951 CAGGCGGTTGTCCCAGTCGTGCAGGTCCTTGGACAGGTCGATCTCCTCGGCGGTCCAGAA 1010 Query 34100 TGATGCCTCTGCCTTTTTATACATATTCCAGATGTCATGATATTGGATTGGGAAAATAAC 34159 || ||||| ||||| || ||||| | ||| || || || || |||| ||||| | || Sbjct 1011 CGACGCCTCGGCCTTCTTGTACATCTGCCAAATCTCGTGGTAGCGGATGGGGAACAGGAC 1070 Query 34160 AAA 34162 ||| Sbjct 1071 AAA 1073 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 629801130269760