Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Malassezia_20furfur_20[genbank_20GCA_5F001265065.1_202015-08-11] 2,092 sequences; 7,790,619 total letters Query= NC_003494.1 Length=111362 Score E Sequences producing significant alignments: (Bits) Value seq1557 87.8 1e-12 seq1649 82.4 5e-11 >seq1557 Length=2964 Score = 87.8 bits (96), Expect = 1e-12 Identities = 113/155 (73%), Gaps = 1/155 (1%) Strand=Plus/Minus Query 22748 TGGCCTTTGCGGCTGTTGAAGGCGTCATGTTTTCTGGGTCATTTGCGGCCATATTCTGGC 22807 |||| ||||| || || || ||| || | || || || || ||||| | || ||||||| Sbjct 631 TGGCGTTTGCCGCCGTGGAGGGCATCTTCTTCTCGGGCTCGTTTGCCTCGATCTTCTGGC 572 Query 22808 TGAAGAAACGTTCGCTCATGCCAGGGTTGGCGTTTTCCAACGAGTTGATTAGCCGTGACG 22867 ||||||| || || ||||| || || |||| || |||||| | || ||||||| Sbjct 571 TGAAGAAGCGCGGTCTGATGCCCGGCCTGTCGTTCTCGAACGAGCTCATCTCGCGTGACG 512 Query 22868 AAGGTCTACACTGTGACTTTGCTTGTATGCTGTTT 22902 | ||||| ||| |||||||| || |||||||| Sbjct 511 AGGGTCTGCAC-CCGACTTTGCGTGCCTGCTGTTT 478 >seq1649 Length=56831 Score = 82.4 bits (90), Expect = 5e-11 Identities = 112/151 (74%), Gaps = 4/151 (3%) Strand=Plus/Plus Query 33571 CCAGAGATGGGCGACAAGTTTGCATCG-TTCACGGCCCAGAAGGGCACGTGCGGCATGAT 33629 || ||| ||||||||||||| | ||| ||||| ||| |||||| || || |||| Sbjct 40431 CCGGAGCTGGGCGACAAGTTCTCCTCGCGCCACGG-CCAAAAGGGCGTATGTGGGCTGAT 40489 Query 33630 -GTACGACCAGTGGGACATGCCGTTCACGGCCGACGGCGTGGTCCCGGACCTAGTCATCA 33688 || | | ||| ||||||||||||||| | | | ||| | ||||||| | |||| | Sbjct 40490 CGTGC-AGCAGGAGGACATGCCGTTCACCGACCAGGGCATCTGCCCGGACATCATCATGA 40548 Query 33689 ACCCGCATGCGTTCCCCTCGCGCATGACGGT 33719 ||||||| | ||||| ||||||||||| || Sbjct 40549 ACCCGCACGGCTTCCCGTCGCGCATGACCGT 40579 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 356224517379076