Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Malassezia_20furfur_20[genbank_20GCA_5F001265065.1_202015-08-11] 2,092 sequences; 7,790,619 total letters Query= NC_004105.1 Length=209771 Score E Sequences producing significant alignments: (Bits) Value seq1557 93.3 6e-14 >seq1557 Length=2964 Score = 93.3 bits (102), Expect = 6e-14 Identities = 300/459 (65%), Gaps = 10/459 (2%) Strand=Plus/Plus Query 42055 AAACATCAAACATGCGAAATCGCAGTGCAGACCCTCATCTCTACTAATTAATTCGTTGGA 42114 ||||| || || || || ||| |||||||||||| || | || | ||||| || Sbjct 478 AAACAGCAGGCACGCAAAGTCGG-GTGCAGACCCTCGTCACGCGAGATGAGCTCGTTCGA 536 Query 42115 AAACGTGAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATAGACGCAAATGATCC 42174 |||| || |||||||| || || ||||| || ||||| || || || ||||| || || Sbjct 537 GAACGACAGGCCGGGCATCAGACCGCGCTTCTTCAGCCAGAAGATCGAGGCAAACGAGCC 596 Query 42175 AGAAAAGAAGATTCCTTCTACTGCCGCAAAGGCAATAAGTCTCTCTCCATAAC-CGGCA- 42232 || |||||||| || || || || ||||| || | ||| | ||| | | ||| ||| Sbjct 597 CGAGAAGAAGATGCCCTCCACGGCGGCAAACGCCACAAGGCGCTC-CGAGAACGACGCAC 655 Query 42233 --CTGTCATGTATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATCGTTT 42290 | ||| ||||| | ||||| |||||||||| || || || ||||| | Sbjct 656 GGCGGTCGCTGATCCAGCGCAGCGCCCACTCGGCCTTCTGCTTCACCACCGGGATCGTCT 715 Query 42291 CTATGGCATTAAAGAGATAGtttttttCATTACTATCTTTAACATATGTATCGATCAAAA 42350 | || ||||| || | | ||| | | || | || || || || | | Sbjct 716 CGATCGCATTGAACAAAAAGTCGCGCTGCTCCGGCTCGCGGATGTACGTGTCAATGAGCA 775 Query 42351 GACTATACATTTCTGAATGAATGTTTTCAATGGCCATCTGAAATCCGTAGAAACATCTGG 42410 | || | || || || ||||| ||||| ||||| || |||||||| || | | Sbjct 776 GCGAGTAGGTCTCCGAGTGGATGTTCTCAATCATGATCTGGAAACCGTAGAAGCAGCGCG 835 Query 42411 CCTCGGTAACCTGTACTTCTGTACAAAATCGTTCAGCTAAA--TTTTCGTTCACTATTCC 42468 |||||| |||| || || | | ||| ||||| | ||| || ||||| || || || Sbjct 836 CCTCGGCGGCCTGCACCTCGGAGCTAAAGCGTTC--CAAAAGGTTCTCGTTGACAATCCC 893 Query 42469 GTCACTGGCTGCAAAAAACGCCAATACATGTTTTATAAA 42507 ||| || ||||| ||||| | || || | ||||| Sbjct 894 GTCCGACGCCGCAAAGAACGCAAGGACGTGGCTGATAAA 932 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 671121649709920