Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Malassezia_20furfur_20[genbank_20GCA_5F001265065.1_202015-08-11] 2,092 sequences; 7,790,619 total letters Query= NC_008187.1 Length=191100 Score E Sequences producing significant alignments: (Bits) Value seq1459 102 1e-16 seq1649 87.8 2e-12 >seq1459 Length=3937 Score = 102 bits (112), Expect = 1e-16 Identities = 137/185 (74%), Gaps = 7/185 (4%) Strand=Plus/Plus Query 126208 TCCTTGCCTCCCTCCAACCGCGTGCCAAACTGACCGTCCGGCTCCAACAACTGCACATTG 126267 |||||||| ||| | |||||||| ||||| |||| ||| | || | || ||| Sbjct 1284 TCCTTGCCGCCCATGGAGCGCGTGCCGAACTGGCCGTTGGGCATGAGCATGTTGACGTTG 1343 Query 126268 TTGGCTCCCACA-AAGTCCTGCGCAAACTTGACAATGGTC-TCGCACAGGTTCTGCTCGC 126325 ||| ||||| || ||||||||||| | ||| |||||| || | ||| |||| |||| Sbjct 1344 TTG-CTCCCGCAGAAGTCCTGCGCGAGGCCGACGATGGTCATCAC-GAGGCTCTGGTCGC 1401 Query 126326 CGTGCTTGTAGTCGGTCTGCTCGGCCACGTAGCCGCTCAGCTGCGCAACCTTGATAAACT 126385 |||| | |||| |||| |||||||| |||||||| ||||||| |||||||| || Sbjct 1402 CGTGGTGGTAGGCGGTGTGCTCGGCGACGTAGCCCTGCAGCTGCTGCACCTTGAT---CT 1458 Query 126386 CGGTC 126390 ||||| Sbjct 1459 CGGTC 1463 >seq1649 Length=56831 Score = 87.8 bits (96), Expect = 2e-12 Identities = 131/181 (72%), Gaps = 4/181 (2%) Strand=Plus/Plus Query 15018 TCGTAAAGGTTGTCATTGGCCAGATGCGCACGCCCG-AGATTGGCGACAAGTTTTGCTC- 15075 |||| |||| |||| |||||| |||| |||||| || | ||||||||||| | ||| Sbjct 40399 TCGTCAAGGCGCTCATCCGCCAGACGCGC-CGCCCGGAGCTGGGCGACAAGTTCTCCTCG 40457 Query 15076 TGGTATGGCGCAAAAGGGCACGTGCGGCATGATTTTCCCCCAGGAAGACATGCCCTTTAC 15135 | | ||| ||||||||| || || |||| | | ||||| |||||||| || || Sbjct 40458 CGCCACGGC-CAAAAGGGCGTATGTGGGCTGATCGTGCAGCAGGAGGACATGCCGTTCAC 40516 Query 15136 CGCGTCAGGCATGACGCCCGACATTATCATCAACCCCAACTGCATCCCGTCCCGCATGAC 15195 || ||||| || ||||| ||||| ||||| || || ||||||| |||||||| Sbjct 40517 CGACCAGGGCATCTGCCCGGACATCATCATGAACCCGCACGGCTTCCCGTCGCGCATGAC 40576 Query 15196 C 15196 | Sbjct 40577 C 40577 Score = 82.4 bits (90), Expect = 9e-11 Identities = 164/243 (67%), Gaps = 0/243 (0%) Strand=Plus/Plus Query 15407 GGACCGACGTACTATCACCGACTCAAACACATGGTAAAGGACAAGATGCACGCGCGATCG 15466 || |||| ||||| || ||||| |||||||| | ||||||||||||||| || || Sbjct 40773 GGCCCGATCTACTACCAGAAGCTCAAGCACATGGTCATGGACAAGATGCACGCACGCGCG 40832 Query 15467 CACGGACAGGTGACGACGCTCCATCGCCAGCCCAACTGCGGTCGATCGCAAGGCGGTGGC 15526 | || | | || |||| |||||||| | | || || |||| | ||||||| Sbjct 40833 CGGGGGCCGCGCGCGGTGCTCACCCGCCAGCCGACCGAGGGCCGCTCGCGCGACGGTGGC 40892 Query 15527 CTCCGCTTTGGAGAGATGGAAAAGGACTGCATTCTGGTGCACGGCGCCACCCAATTCCTC 15586 || ||| | || |||||||| ||||| | | | |||||||||| || ||||| Sbjct 40893 CTGCGCCTCGGCGAGATGGAGCGCGACTGTCTCATCGGATACGGCGCCACGCAGCTCCTC 40952 Query 15587 AACGAGCGCATGTTTCTCAACAGTGACCCGTTCCAGATTGACGTGTGCAAAGACTGCGGC 15646 ||||||| | | ||| | ||| |||| | | |||||||| | | |||||| Sbjct 40953 CTCGAGCGCCTCATGATCAGCTCCGACGCGTTTGTGGTGAACGTGTGCGAGCAGTGCGGC 41012 Query 15647 ATG 15649 || Sbjct 41013 CTG 41015 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 611376012099200