Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Malassezia_20furfur_20[genbank_20GCA_5F001265065.1_202015-08-11] 2,092 sequences; 7,790,619 total letters Query= NC_011616.1 Length=148634 Score E Sequences producing significant alignments: (Bits) Value seq1557 136 4e-27 seq1550 113 4e-20 seq1375 105 6e-18 seq1796 100 3e-16 seq1597 87.8 2e-12 >seq1557 Length=2964 Score = 136 bits (150), Expect = 4e-27 Identities = 296/439 (67%), Gaps = 18/439 (4%) Strand=Plus/Minus Query 47148 GCTTTCGCCATCGTCGAGGGCGTCTTCTTCTCGGGCAGCTTTGCGGCGATATTTTACATG 47207 || || ||| ||| |||||| |||||||||||||| ||||| |||| || | || Sbjct 629 GCGTTTGCCGCCGTGGAGGGCATCTTCTTCTCGGGCTCGTTTGCCTCGATCTTCTGGCTG 570 Query 47208 AAAACCAAAGGAGTTATGCCCGGCCTCACGTTTAGCAACGAGCTAATCTCGAGAGACGAA 47267 || | || | ||||||||||| |||| |||||||| |||||| | ||||| Sbjct 569 AAGAAGCGCGGTCTGATGCCCGGCCTGTCGTTCTCGAACGAGCTCATCTCGCGTGACGAG 510 Query 47268 GGCCTGCACACCAACTTTGCCTGTCT-CTACTA---CAACACTAGAGTCGATCAAAAGTT 47323 || |||||| || ||||||| || || || | || | | ||| || | Sbjct 509 GGTCTGCAC-CCGACTTTGCGTGCCTGCTGTTTGGCCACCTCAAGAAGCGCGC------- 458 Query 47324 GGACGTGCCCACCGTCAGCGACATGTTTGCCGAAGCCGTCGCCATTGAGATGGAGTTTTT 47383 | || ||| || | | ||| || |||| || || || || ||| || || | Sbjct 457 GCACCCCGACACGGTGAACCGCATCATTACCGAGGCGGTGGCGATCGAGCAAGACTTCCT 398 Query 47384 CGCCGAGGCTCTGCCCGAATCTTTAGTGGGAATGAACGCGGAGATGATGAGAAAGTACAT 47443 |||| || ||||||| || | | || ||||||||| ||||| | ||||||| Sbjct 397 TTCCGACGCGCTGCCCGTGTCGCTGATTGGCATGAACGCGCGCCTGATGTGCCAGTACAT 338 Query 47444 CGAATTTGTCGCCGACCGCCTGCTCGTTCAGCTAAAGTATCCCAAGATTTACCACACCGA 47503 || ||||| || |||||||||||||| ||| | || ||| ||| || | Sbjct 337 TGAGTTTGTGGCGGACCGCCTGCTCGTGGCGCTGGGCAACCCGAAGCACTACAACGCGAC 278 Query 47504 GAATCCATTCGAGTTTATGAACAACATTTCGCTCGAGGGCAAGACCAACTTTTTCGAG-- 47561 ||| || ||||| |||||| | ||||||||||| |||||||| | |||||||||||| Sbjct 277 GAACCCCTTCGACTTTATGGAGAACATTTCGCTGCAGGGCAAGTCGAACTTTTTCGAGCG 218 Query 47562 -AAGCGCGTCGGCGAATAT 47579 ||| |||||||| ||| Sbjct 217 CAAG---GTCGGCGACTAT 202 >seq1550 Length=26160 Score = 113 bits (124), Expect = 4e-20 Identities = 164/232 (71%), Gaps = 0/232 (0%) Strand=Plus/Minus Query 126884 GCTCCACCGCGTAATCGCAACACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCG 126943 || ||||| || | || | ||| | || | ||| ||||| || || || ||||| ||| Sbjct 24335 GCACCACCACGCAGGCGGAGCACAAGGTGCAGCGTCGACTCCTTCTGGATGTTGTAGTCG 24276 Query 126944 CCCATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGA 127003 | | ||| || ||| || ||||| || || ||| |||||| ||||| || || ||| Sbjct 24275 CTGAGCGTACGGCCATCCTCGAGCTGCTTGCCGGCGAAGATCAGGCGCTGTTGGTCCGGA 24216 Query 127004 GGTATGCCCTCCTTGTCCGTGATTTTCTGCTTGAGTTGTTCGACGGTGTCCGTACTCTCG 127063 || ||||||||||||||| ||| || ||| | | |||| |||||||| |||| Sbjct 24215 GGAATGCCCTCCTTGTCCTGGATCTTGGCCTTCACATTCTCGATGGTGTCCGACGACTCG 24156 Query 127064 ACTTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCATGG 127115 || |||| ||| | ||| || || || || || || || || | ||||||| Sbjct 24155 ACCTCGAGGGTAATCGTCTTACCCGTGAGGGTCTTGACGAACACTTGCATGG 24104 >seq1375 Length=5294 Score = 105 bits (116), Expect = 6e-18 Identities = 150/209 (72%), Gaps = 4/209 (2%) Strand=Plus/Minus Query 147273 GTAGATGCCGTCGATGCTGTCTTCCTTGATGCATTGCAGGAAACACGAACACATTTGGGG 147332 ||||||||| ||||| ||| ||||| ||||| |||||| ||||| |||| || || Sbjct 1249 GTAGATGCCCTCGATCGAGTCGTCCTTCATGCACACCAGGAAGCACGACGACATCTGCGG 1190 Query 147333 ACGACACGTGCCCGCCGCAAACAGCGTGGGGCTGGCGTGCGTGAACG--TGCCCAGACTC 147390 | ||||||||| || ||||| || ||||||||| || | | | | ||| Sbjct 1189 GCTCGGCGTGCCCGCGTTGAAGAGCGTCGGCGAGGCGTGCGTAAAGGCCTTCTCCGAC-- 1132 Query 147391 ATCAATTGATACGTTTCAATGGCGCTCATAACGTCATCGCCGTGAATGGCCAGGGCGACG 147450 |||| | ||||| || || |||||| ||||| |||||| ||| ||| || || Sbjct 1131 ATCATGTTGTACGTCTCGATCGCGCTCTCGACGTCGGTGCCGTGGATGCCCACCGCCACA 1072 Query 147451 CGCATGAGCATGTGCTGGGGTCGTTCCGC 147479 |||||||||||||||||||| || || || Sbjct 1071 CGCATGAGCATGTGCTGGGGGCGCTCGGC 1043 >seq1796 Length=1778 Score = 100 bits (110), Expect = 3e-16 Identities = 132/183 (72%), Gaps = 0/183 (0%) Strand=Plus/Plus Query 126932 ATATTGTAATCGCCCATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTAGATCAATCGC 126991 || ||||| |||| || ||| || ||| || ||||| || ||||| |||| | ||| Sbjct 1 ATGTTGTAGTCGCTCAGCGTACGGCCATCCTCAAGCTGCTTGCCAGCAAAGATAAGGCGC 60 Query 126992 TGCTGATCGGGAGGTATGCCCTCCTTGTCCGTGATTTTCTGCTTGAGTTGTTCGACGGTG 127051 ||||| || || || || |||||||||||| ||| || ||||| | |||| ||| Sbjct 61 TGCTGGTCCGGGGGAATACCCTCCTTGTCCTGGATCTTGGCCTTGACGTTCTCGATCGTG 120 Query 127052 TCCGTACTCTCGACTTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGC 127111 |||| |||||| |||| || | ||| || || ||||| || || || |||| |||| Sbjct 121 TCCGAGGACTCGACCTCGAGCGTAATCGTCTTTCCTGTCAGGGTCTTAACGAAAACCTGC 180 Query 127112 ATG 127114 ||| Sbjct 181 ATG 183 >seq1597 Length=2736 Score = 87.8 bits (96), Expect = 2e-12 Identities = 147/213 (69%), Gaps = 0/213 (0%) Strand=Plus/Plus Query 126904 CACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCCCATCGTGCGAGAATCGTC 126963 ||||| || | ||| ||||| || || || ||||| |||| | |||||| || || Sbjct 298 CACCAGGTGGAGCGTCGACTCCTTCTGGATGTTGTAGTCGCTGAGCGTGCGGCCGTCCTC 357 Query 126964 TAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGTATGCCCTCCTTGTCCGT 127023 ||||| || || || |||| | |||||||| || || || || |||||||||||| Sbjct 358 GAGCTGCTTGCCCGCAAAGATGAGCCGCTGCTGGTCCGGGGGGATACCCTCCTTGTCCTG 417 Query 127024 GATTTTCTGCTTGAGTTGTTCGACGGTGTCCGTACTCTCGACTTCGACGGTCACCGTTTT 127083 || || ||||| |||| ||||| | |||||| |||| || | ||| || Sbjct 418 GACCTTGGACTTGACGACGTCGATCGTGTCGCTCGACTCGACCTCGAGCGTGATCGTCTT 477 Query 127084 GCCGGTCAGAGTTTTTACAAAAATCTGCATGGC 127116 ||| || || || || | || || |||||||| Sbjct 478 GCCCGTGAGCGTCTTGATGAAGATTTGCATGGC 510 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 475488365654080