Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Malassezia_20furfur_20[genbank_20GCA_5F001265065.1_202015-08-11] 2,092 sequences; 7,790,619 total letters Query= NC_013772.1 Length=176677 Score E Sequences producing significant alignments: (Bits) Value seq1597 140 4e-28 seq1550 109 6e-19 seq1665 102 9e-17 seq1796 86.0 7e-12 >seq1597 Length=2736 Score = 140 bits (154), Expect = 4e-28 Identities = 159/211 (75%), Gaps = 2/211 (1%) Strand=Plus/Plus Query 46384 CACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTC 46443 |||||| || | || |||||| ||||| ||||||||| || ||||| |||| || Sbjct 298 CACCAGGTGGAGCGTCGACTCCTTCTGGATGTTGTAGTCGCTGAGCGTGCGGCCGTCCTC 357 Query 46444 GAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCAT 46503 |||||||||||| || || || | ||||||||||| | || | | |||||||||| Sbjct 358 GAGCTGCTTGCCCGCAAAGATGAGCCGCTGCTGGTCCGGGGGGATACCCTCCTTGTCCTG 417 Query 46504 GATCTTCTTCTTGAGCGTCG-CCACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTT 46562 || ||| ||||| || || | | |||||||||||| || || || | |||||| || | Sbjct 418 GACCTTGGACTTGA-CGACGTCGATCGTGTCGCTCGACTCGACCTCGAGCGTGATCGTCT 476 Query 46563 TGCCCGTCAGCGTTTTAACAAAGATTTGCAT 46593 ||||||| ||||| || | ||||||||||| Sbjct 477 TGCCCGTGAGCGTCTTGATGAAGATTTGCAT 507 >seq1550 Length=26160 Score = 109 bits (120), Expect = 6e-19 Identities = 150/210 (71%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 46384 CACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTC 46443 ||| || |||| || |||||| ||||| ||||||||| || || || | || || Sbjct 24315 CACAAGGTGCAGCGTCGACTCCTTCTGGATGTTGTAGTCGCTGAGCGTACGGCCATCCTC 24256 Query 46444 GAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCAT 46503 |||||||||||||||||| |||| |||||| ||||| | || | || |||||||||| Sbjct 24255 GAGCTGCTTGCCGGCGAAGATCAGGCGCTGTTGGTCCGGAGGAATGCCCTCCTTGTCCTG 24196 Query 46504 GATCTTCTTCTTGAGCGTCGCCACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTTT 46563 |||||| ||| | || | | ||||| ||| || || || | || || || || Sbjct 24195 GATCTTGGCCTTCACATTCTCGATGGTGTCCGACGACTCGACCTCGAGGGTAATCGTCTT 24136 Query 46564 GCCCGTCAGCGTTTTAACAAAGATTTGCAT 46593 ||||| || || || || || | |||||| Sbjct 24135 ACCCGTGAGGGTCTTGACGAACACTTGCAT 24106 >seq1665 Length=2274 Score = 102 bits (112), Expect = 9e-17 Identities = 101/131 (77%), Gaps = 0/131 (0%) Strand=Plus/Minus Query 46379 CGCAACACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCG 46438 |||| || || |||| || |||||| ||||| ||||||||| || |||||| || Sbjct 437 CGCAGGACGAGGTGCAGCGTCGACTCCTTCTGGATGTTGTAGTCGCTCAGCGTGCGCCCG 378 Query 46439 TCGTCGAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTG 46498 || ||||||||||||||||| || || | ||||||||||| | ||| | || |||||| Sbjct 377 TCCTCGAGCTGCTTGCCGGCAAAGATGAGACGCTGCTGGTCCGGCGGGATGCCCTCCTTA 318 Query 46499 TCCATGATCTT 46509 ||| |||||| Sbjct 317 TCCTGGATCTT 307 >seq1796 Length=1778 Score = 86.0 bits (94), Expect = 7e-12 Identities = 128/182 (70%), Gaps = 0/182 (0%) Strand=Plus/Plus Query 46412 ATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAAGCGC 46471 || ||||||||| || || || | || || ||||||||||| || || || | |||| Sbjct 1 ATGTTGTAGTCGCTCAGCGTACGGCCATCCTCAAGCTGCTTGCCAGCAAAGATAAGGCGC 60 Query 46472 TGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGTCGCCACCGTG 46531 |||||||| | || | | |||||||||| |||||| ||||| || | | |||| Sbjct 61 TGCTGGTCCGGGGGAATACCCTCCTTGTCCTGGATCTTGGCCTTGACGTTCTCGATCGTG 120 Query 46532 TCGCTCGATTCCACATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAACAAAGATTTGC 46591 || || || || || | ||| || || || || ||||| || ||||| || | ||| Sbjct 121 TCCGAGGACTCGACCTCGAGCGTAATCGTCTTTCCTGTCAGGGTCTTAACGAAAACCTGC 180 Query 46592 AT 46593 || Sbjct 181 AT 182 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 565223619015840