Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Malassezia_20furfur_20[genbank_20GCA_5F001265065.1_202015-08-11] 2,092 sequences; 7,790,619 total letters Query= NC_017940.1 Length=127732 Score E Sequences producing significant alignments: (Bits) Value seq1338 91.5 1e-13 >seq1338 Length=6180 Score = 91.5 bits (100), Expect = 1e-13 Identities = 149/215 (69%), Gaps = 0/215 (0%) Strand=Plus/Minus Query 29763 TGTGGGAAAGGGTCTGGGCTCCCTCTCGAGCTGAGTCTTCAGCGGTTCCACGTGATCCAG 29822 |||||| |||| | ||||| | | ||||| || |||||| || | || || || Sbjct 1931 TGTGGGGAAGGCCCGAGGCTCGCGCATCAGCTGCTGCTGCAGCGGCTCGATATGGTCGAG 1872 Query 29823 GTAGACGTGAGCGTCTCCCAGGGTGTGGACAAACTCTCCCGGTTCTAGCCCGGTGACGTG 29882 ||| ||||||||||| |||| || | || || ||| || || |||||||| Sbjct 1871 GTACACGTGAGCGTCACCCATGGCCAGCGTGAATTCGGCCGCCTCACATCCCGTGACGTG 1812 Query 29883 AGCCATCATGTACGTGAGGAGAGAGTAGCTGGCGATGTTAAAGGGTACCCCGAGCCCCAT 29942 || || | || ||||| || | |||||| || ||||| ||||| || || | |||| Sbjct 1811 CGCAATGAGGTGGGTGAGTAGCGCGTAGCTCGCAATGTTGAAGGGCACGCCCAAGCCCAG 1752 Query 29943 GTCCCCCGACCTCTGGTAGAGCTGACACGAGAGCT 29977 || | ||| | |||||| | ||| |||||||||| Sbjct 1751 ATCGCACGAGCGCTGGTACATCTGGCACGAGAGCT 1717 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 408607181783516