Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Malassezia_20furfur_20[genbank_20GCA_5F001265065.1_202015-08-11] 2,092 sequences; 7,790,619 total letters Query= NC_028091.1 Length=196300 Score E Sequences producing significant alignments: (Bits) Value seq1375 141 1e-28 seq1557 116 5e-21 >seq1375 Length=5294 Score = 141 bits (156), Expect = 1e-28 Identities = 557/865 (64%), Gaps = 17/865 (2%) Strand=Plus/Minus Query 111230 GGAAGGGCGATTGATGCCAAATTGCAAACAGCCGTCTCATCCTTATCTGTGTACTCTAAA 111289 || || || || || || | ||||| || |||||||| || ||||||| | Sbjct 1908 GGGAGCGCAATCGACGCGAGGTTGCACACCGCCGTCTCGTCGGGCGAGCTGTACTCCATG 1849 Query 111290 ATTTCTGTACATAAGTTGGAACTCTTAATCGTCCCCAAATTCTTTTGGTTACTCTTCTTG 111349 || || || || | ||| || ||||| ||| || | ||||| ||||| ||||| | Sbjct 1848 ATCTCGGTGCACAGGTTCGAGCTCTTGATCACGCCGACGTTCTTCTGGTTGCTCTTGCGG 1789 Query 111350 TTGCACGCATCCTTGTAGAGCATGTAGGGCGTCCCCGTCTCCGTCTGTGATTTGAGAATA 111409 || || ||||||||||||||| | ||||| |||||||| |||| | | ||| || Sbjct 1788 TTCGCGGCGTCCTTGTAGAGCATGAACGGCGTGCCCGTCTCAATCTGCGCCTCGAGGATC 1729 Query 111410 GCCTTCCA-AACATCGGCGGCTGGTACAATGGCGTTGGCCCGTCCCTCCGCCTCGTACTT 111468 || | ||| | | || ||| || | || || ||| | || ||||| |||||| Sbjct 1728 GCGTACCAGAGCTTCTGCGCCTTG-ACGGTGCGCTTGCCGCGGCCCTCGCGCTCGTAGCG 1670 Query 111469 TGTGTAGAGGGCTTCAAACTCCTCACCCACCGCGTCGGAGAGACCTGGTGCCTTGTCTGG 111528 ||| || | ||||||||||| || ||||| ||| || || |||| | | || Sbjct 1669 CTCGTACAGCTCGTCAAACTCCTCGCCGTAGCAGTCGGCGAGGCCGGGCGCCTCGGCGGG 1610 Query 111529 ACAGAAAAGAGACCATTGACCACCTTCCTCAACCCGCTTCATGAAAAGGTCTGGAATCCA 111588 || | || | ||| | || || | ||| || || ||| || ||||| || | ||| Sbjct 1609 GCACATCAGCGTCCAGTCGCCGCCCTGCTCGACACGGCGCATAAACAGGTCCGGCACCCA 1550 Query 111589 CAGGGATGAAAAGAGATCTCTACACCGAGCCTCTTCGTCACCTTGGTTGAGTCGTAACTC 111648 ||| | | || || || | || ||||||| | || ||||| || | || Sbjct 1549 CAGCGCGTAGAACAGGTCGCGCGCGCGCACCTCTTCCTTGCCGTGGTTCTTGCGCAGGTC 1490 Query 111649 AAGGAACTCCATGATATCCGCGTGCCATGGCTCAAGATAGACTGCGATAGATCC----CT 111704 | ||||| | | |||| |||||| ||||| || |||| || | | || | Sbjct 1489 GATAAACTCAAACACGTCCGAGTGCCACGGCTCGAGGTAGATGGCAAAGGCGCCGGGGCG 1430 Query 111705 TTCGACGCCCAGCTTGATTTACATAGCGCGCTGTGGCGTTAAATACGCGAAGCATTGGAA 111764 | | | ||| | || | || |||||||| ||| ||| | ||||| ||||| || | Sbjct 1429 CTTGTTG-CCACCCTGGTCGACGTAGCGCGCCGTGTTGTTGTACACGCGGAGCATGGGCA 1371 Query 111765 TAATACCATCTGAT-TGACCATTTGTCCCCCGAA--TACGAGATTTATTGGCTCTCACAT 111821 ||| || | || | ||| || || || || |||||| || | | | Sbjct 1370 CAATGCCGT-TGCTCACACCGTTCGTGCCGGCAATGTACGAG--CCCGTGCCGCGGATGC 1314 Query 111822 CATGGATGTGCATCCCAATACCCCCAGCCCACTTTGAGATTTGCGCACACTCCGTAAGAG 111881 ||||||| | ||||| || || ||| ||| ||||| ||||||| | | || | Sbjct 1313 AGTGGATGTTGAGACCAATGCCGCCCGCCGTCTTGGAGATCATCGCACACGACTTGAGCG 1254 Query 111882 TTCCATAGATACCGTTGATTGAGTCCTCCTTGTTGGCGATAAGGAAGCAACTGGACATCT 111941 | | ||||| || | ||| ||||| ||||| || | |||||||| ||||||| Sbjct 1253 TGTCGTAGATGCCCTCGATCGAGTCGTCCTTCATGCACACCAGGAAGCACGACGACATCT 1194 Query 111942 GCGGTCTTGGTGTACCAGCATTGAAGAGGGTTGGTGTTGCGTGAATGAA--CATACCTTG 111999 |||| || || || || || |||||||| || || | ||||| | || | | | | Sbjct 1193 GCGGGCTCGGCGTGCCCGCGTTGAAGAGCGTCGGCGAGGCGTGCGTAAAGGCCTTC--TC 1136 Query 112000 GGACATCTTGTCGTATGTCTCCAAGACAGAATCAATGTCTTCCCCGTGGATGCCGATTGC 112059 |||||| ||| ||| ||||| | | || | ||| ||||||||||| | || Sbjct 1135 CGACATCATGTTGTACGTCTCGATCGCGCTCTCGACGTCGGTGCCGTGGATGCCCACCGC 1076 Query 112060 GACCCGCATGAACATGTACTGTGGG 112084 || ||||||| ||||| ||| ||| Sbjct 1075 CACACGCATGAGCATGTGCTGGGGG 1051 >seq1557 Length=2964 Score = 116 bits (128), Expect = 5e-21 Identities = 308/460 (67%), Gaps = 19/460 (4%) Strand=Plus/Plus Query 122369 CATAGTCCCCGACCCGCTTCTCAAAGAAGTTGGTCTTCCCATCAAGGCTAATGTTTTCCA 122428 ||||||| |||||| ||| || ||||| | ||| || | || |||||| |||| Sbjct 201 CATAGTCGCCGACCTTGCGCTCGAAAAAGTTCGACTTGCCCTGCAGCGAAATGTTCTCCA 260 Query 122429 TAAAGTCAAATGGATTCTTCGCGTTCCAAAT----GGGTGGCAC--CCCAACTTGTTTGA 122482 ||||||| || || ||| ||||||| | |||| || | | | || || Sbjct 261 TAAAGTCGAAGGGGTTCGTCGCGTTGTAGTGCTTCGGGTTGCCCAGCGCCAC------GA 314 Query 122483 GGAGACGATCCGACACATACTCAATGTACTCGGACATCTTCTCAGAGTTCATACCGATGA 122542 | || || |||| |||| |||||||||||| | ||||| | |||||| || || | Sbjct 315 GCAGGCGGTCCGCCACAAACTCAATGTACTGGCACATCAGGCGCGCGTTCATGCCAATCA 374 Query 122543 GGTTACATGGG-AGTGCGTCCAAGATGAACCCTTTCTCAATCTCAACCGCCTCTTTCACG 122601 | ||| ||| || ||||| | | ||| ||| ||| ||| | |||||||| | | | Sbjct 375 GCG-ACACGGGCAGCGCGTCGGAAAGGAAGTCTTGCTCGATCGCCACCGCCTCGGTAATG 433 Query 122602 ATGGCGTGGATAGTTTCGGTAGTGGGTCTATTACGCAAAGTCTTGAAG-AGCTC-CACGG 122659 ||| || | || |||| ||| | | | | || || ||| |||| Sbjct 434 ATGCGGTTCACCGTGTCGGG-GTGCGCGCGCTTCTTGAGGTGGCCAAACAGCAGGCACG- 491 Query 122660 CAAACTCCTGGTGGAGACCCTCATCTCGGGAAATAAGTTCATTTGAGAAGCATAGACCTG 122719 |||| || |||| |||||||| || || || || || || || ||||| | || || | Sbjct 492 CAAAGTCG-GGTGCAGACCCTCGTCACGCGAGATGAGCTCGTTCGAGAACGACAGGCCGG 550 Query 122720 GCATGAGACCCCGCTTCTTCAACCAATAAATAGCGCAGAATGACCCGGAGAAGAAGATAC 122779 |||| ||||| |||||||||| ||| | || | | || || || ||||||||||| | Sbjct 551 GCATCAGACCGCGCTTCTTCAGCCAGAAGATCGAGGCAAACGAGCCCGAGAAGAAGATGC 610 Query 122780 CCTCCACACACGCAAACGCAAAAAGGCGTTCGGCGAAGGA 122819 ||||||| |||||||| | |||||| || | ||| || Sbjct 611 CCTCCACGGCGGCAAACGCCACAAGGCGCTCCGAGAACGA 650 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 628015576963200