Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Malassezia_20furfur_20[genbank_20GCA_5F001265065.1_202015-08-11] 2,092 sequences; 7,790,619 total letters Query= NC_028094.1 Length=473558 Score E Sequences producing significant alignments: (Bits) Value seq1300 145 2e-29 seq1796 102 2e-16 >seq1300 Length=7151 Score = 145 bits (160), Expect = 2e-29 Identities = 457/705 (65%), Gaps = 11/705 (2%) Strand=Plus/Plus Query 349199 GCTATAGGAATCGATTTAGGTACTACTTATTCTTGTGTTGCTGTTTGGCAAAATGATCGT 349258 ||||| || || || || |||||||| || || ||||| || || ||||| || || ||| Sbjct 3769 GCTATTGGTATTGACTTGGGTACTACCTACTCGTGTGTGGCCGTCTGGCAGAACGACCGT 3828 Query 349259 GTAGAAATAATTGCAAATGATCAAGGTAACAGAACAACGCCATCATACGTTGCATTTACC 349318 || || | ||||| || || || || ||| | || ||||| || |||||||| || ||| Sbjct 3829 GTTGAGGTCATTGCCAACGACCAGGGCAACCGTACGACGCCCTCGTACGTTGCCTTCACC 3888 Query 349319 GAAACTGAGCGTATGATTGGTGATTCTGCAAAAAATCAAGCTGCTGCTAATCCAAAAAAT 349378 || || |||||| | || ||||| | || || || || | || || || | || Sbjct 3889 GACACCGAGCGTCTCATCGGTGACGCCGCCAAGAACCAGGTGGCGATGAACCCGCATAAC 3948 Query 349379 ACGGTTTTTGATGCTAAGCGACTTATTGGTAG-AAGTTTTTCTGACAAATCTACA---CA 349434 || || ||||| || ||||| || || ||| | |||||| || | || || Sbjct 3949 ACCGTCTTTGACGCCAAGCGTCTCATCGGTCGCAAGTTT----GAGGACCCTGAGGTGCA 4004 Query 349435 ATCTGATCTAAAACATTTTCCTTTTACTGTTGTTCCAAAAGACGGTGATAAACCAATTAT 349494 | || | || || | || || || || || | || || || || | || Sbjct 4005 GGCCGACATGAAGCACTGGCCCTTCACCGTCGTCGCCCGCGATGGC---AAGCCCGTCAT 4061 Query 349495 TGAGGTTGAATATAAAGGTGAACAAAAACAATTTTTACCCGAAGAAATTTCATCAATGGT 349554 |||| || || || || || | || || ||||| || || || | ||||| Sbjct 4062 CCAGGTGGAGTACAAGGGCGAGAAGAAGACCTTCACCCCCGAGGAGATCTCGGCCATGGT 4121 Query 349555 TTTAGTTAAAATGAAGGAAATTGCTGAAGCATATTTAGGTGAAACAGTAACTGATGCTGT 349614 | || ||| || || || || || || | |||| || || | || || || Sbjct 4122 CCTCACGAAGATGCGCGAGATCGCCGAGGCCTACCTCGGTGGCACCGTCAAGGACGCCGT 4181 Query 349615 TATTACTGTACCAGCCTATTTTAATGATGCCCAGCGTTCTGCAACAAAAGATGCTGGCAG 349674 || || || || ||||| || || || | ||||| || || || || ||||| Sbjct 4182 GATCACGGTCCCGGCCTACTTCAACGACTCGCAGCGCCAGGCCACCAAGGACGCTGGTGT 4241 Query 349675 CATTGCGGGGTTAAATGTTCTAAGAATGATTAATGAACCCACTGCTGCAGCAATTGCATA 349734 |||||||| | || || || | || || || || || || || || || ||||| || Sbjct 4242 GATTGCGGGCCTCAACGTGCTCCGTATCATCAACGAGCCGACCGCCGCCGCGATTGCGTA 4301 Query 349735 TGGGCTTGATAAAATGAGTGACCAAGaaaaaaaTATTCTTATTTTTGATTTAGGTGGTGG 349794 || || || || | | ||| || || || | || || || || | |||||||| Sbjct 4302 CGGTCTCGACAAGAAGTCGGACAGCGAGAAGAACGTGCTCATCTTCGACCTGGGTGGTGG 4361 Query 349795 TACTTTTGATGTATCACTACTAACACTTGAAGAGGGAATTTTTGAAGTTAAAGCAACTGC 349854 ||| || ||||| || || || || |||| ||||| || || || || || || || || Sbjct 4362 TACCTTCGATGTGTCGCTCCTGACCATTGAGGAGGGTATCTTCGAGGTCAAGGCCACCGC 4421 Query 349855 TGGTGATACACATCTTGGTGGAGAAGATTTTGATAATCGTCTCGT 349899 ||||| || || || ||||| || || ||||| || || || || Sbjct 4422 CGGTGACACGCACCTGGGTGGTGAGGACTTTGACAACCGCCTGGT 4466 >seq1796 Length=1778 Score = 102 bits (112), Expect = 2e-16 Identities = 121/164 (74%), Gaps = 0/164 (0%) Strand=Plus/Plus Query 140574 GTTCGCCCATCTTCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGATCAGGAGGAATT 140633 || || ||||| ||||| || || ||||||||||| || || ||||| || || ||||| Sbjct 19 GTACGGCCATCCTCAAGCTGCTTGCCAGCAAAGATAAGGCGCTGCTGGTCCGGGGGAATA 78 Query 140634 CCTTCTTTATCCTGAATTTTAGCTTTTACATTATCAATCGAATCAGATGGTTCAACTTCA 140693 || || || ||||| || || || || || || || |||| || || | || || || Sbjct 79 CCCTCCTTGTCCTGGATCTTGGCCTTGACGTTCTCGATCGTGTCCGAGGACTCGACCTCG 138 Query 140694 AGTGTAACTGTCTTTCCGGTTAGTGTTTTTACAAAAATCTGCAT 140737 || |||| |||||||| || || || || || |||| |||||| Sbjct 139 AGCGTAATCGTCTTTCCTGTCAGGGTCTTAACGAAAACCTGCAT 182 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1515213785499876