Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Malassezia_20furfur_20[genbank_20GCA_5F001265065.1_202015-08-11] 2,092 sequences; 7,790,619 total letters Query= NC_029692.1 Length=362276 Score E Sequences producing significant alignments: (Bits) Value seq1550 185 2e-41 seq1796 145 2e-29 seq1597 118 2e-21 seq1665 111 4e-19 >seq1550 Length=26160 Score = 185 bits (204), Expect = 2e-41 Identities = 168/212 (79%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCT 210962 || |||||||| || || ||||| || |||||||| || || || || | ||||| Sbjct 24317 AGCACAAGGTGCAGCGTCGACTCCTTCTGGATGTTGTAGTCGCTGAGCGTACGGCCATCC 24258 Query 210963 TCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCC 211022 || ||||||||||| |||||||| ||||| |||||||| ||||||| || ||||||||| Sbjct 24257 TCGAGCTGCTTGCCGGCGAAGATCAGGCGCTGTTGGTCCGGAGGAATGCCCTCCTTGTCC 24198 Query 211023 TGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTC 211082 |||||||| ||||| || ||||||||||| || || |||||||| || |||||| Sbjct 24197 TGGATCTTGGCCTTCACATTCTCGATGGTGTCCGACGACTCGACCTCGAGGGTAATCGTC 24138 Query 211083 TTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114 || |||||||| ||||| || ||||| ||||| Sbjct 24137 TTACCCGTGAGGGTCTTGACGAACACTTGCAT 24106 >seq1796 Length=1778 Score = 145 bits (160), Expect = 2e-29 Identities = 127/158 (80%), Gaps = 0/158 (0%) Strand=Plus/Plus Query 210957 CCATCTTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCC 211016 ||||| || ||||||||||| || ||||||||||| || ||||| || |||| || ||| Sbjct 25 CCATCCTCAAGCTGCTTGCCAGCAAAGATAAGGCGCTGCTGGTCCGGGGGAATACCCTCC 84 Query 211017 TTGTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTG 211076 |||||||||||||| || ||||| ||||| ||||| ||| || |||||||| || Sbjct 85 TTGTCCTGGATCTTGGCCTTGACGTTCTCGATCGTGTCCGAGGACTCGACCTCGAGCGTA 144 Query 211077 ATCGTCTTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114 ||||||||||| || || ||||| || || |||||||| Sbjct 145 ATCGTCTTTCCTGTCAGGGTCTTAACGAAAACCTGCAT 182 >seq1597 Length=2736 Score = 118 bits (130), Expect = 2e-21 Identities = 147/200 (74%), Gaps = 6/200 (3%) Strand=Plus/Plus Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCT 210962 || || ||||| || || ||||| || |||||||| || || || || | || || Sbjct 296 AGCACCAGGTGGAGCGTCGACTCCTTCTGGATGTTGTAGTCGCTGAGCGTGCGGCCGTCC 355 Query 210963 TCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCC 211022 || ||||||||||| || ||||| || || || ||||| || || | || ||||||||| Sbjct 356 TCGAGCTGCTTGCCCGCAAAGATGAGCCGCTGCTGGTCCGGGGGGATACCCTCCTTGTCC 415 Query 211023 TGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCT---TTCAACCTCGAGAGTGATC 211079 |||| ||| || ||| ||||| ||||| ||| || |||||||| |||||| Sbjct 416 TGGACCTTGGACTTGACGACGTCGATCGTGTC---GCTCGACTCGACCTCGAGCGTGATC 472 Query 211080 GTCTTTCCCGTGAGAGTCTT 211099 ||||| |||||||| ||||| Sbjct 473 GTCTTGCCCGTGAGCGTCTT 492 >seq1665 Length=2274 Score = 111 bits (122), Expect = 4e-19 Identities = 166/245 (68%), Gaps = 33/245 (13%) Strand=Plus/Minus Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCT 210962 ||||| ||||| || || ||||| || |||||||| || || || || | || || Sbjct 434 AGGACGAGGTGCAGCGTCGACTCCTTCTGGATGTTGTAGTCGCTCAGCGTGCGCCCGTCC 375 Query 210963 TCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCC 211022 || ||||||||||| || ||||| || || || ||||| || || | || ||||| ||| Sbjct 374 TCGAGCTGCTTGCCGGCAAAGATGAGACGCTGCTGGTCCGGCGGGATGCCCTCCTTATCC 315 Query 211023 TGGATCTTTTGTTTCACG---------------------------------TTTTCGATG 211049 |||||||| |||||| || ||||| Sbjct 314 TGGATCTTGGCTTTCACTGCAACGTCAGCATCCACGCACGCCCACGTACCATTCTCGATC 255 Query 211050 GTGTCAGAGCTTTCAACCTCGAGAGTGATCGTCTTTCCCGTGAGAGTCTTTACAAACACC 211109 ||||| ||| || |||||||| |||||||||||||||||||| ||||| ||||||||| Sbjct 254 GTGTCGCTGCTCTCCACCTCGAGGGTGATCGTCTTTCCCGTGAGCGTCTTGACAAACACC 195 Query 211110 TGCAT 211114 ||||| Sbjct 194 TGCAT 190 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1159120930379580