Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Malassezia_20furfur_20[genbank_20GCA_5F001265065.1_202015-08-11] 2,092 sequences; 7,790,619 total letters Query= NC_029997.1 Length=105667 Score E Sequences producing significant alignments: (Bits) Value seq1550 84.2 1e-11 >seq1550 Length=26160 Score = 84.2 bits (92), Expect = 1e-11 Identities = 139/198 (70%), Gaps = 2/198 (1%) Strand=Plus/Plus Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670 ||||| | ||||| || ||||||||||| || ||||| || ||||| || || || || Sbjct 24106 ATGCAAGTGTTCGTCAAGACCCTCACGGGTAAGACGATTACCCTCGAGGTCGAGTCGTCG 24165 Query 23671 GACACTGTTGA-AATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCA 23729 ||||| | || ||| | || | || || ||||| || || | || || || || Sbjct 24166 GACACCATCGAGAATGTGAAGGC-CAAGATCCAGGACAAGGAGGGCATTCCTCCGGACCA 24224 Query 23730 ACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAA 23789 |||||| | || || |||||||| || || || || | || || | |||| ||||| Sbjct 24225 ACAGCGCCTGATCTTCGCCGGCAAGCAGCTCGAGGATGGCCGTACGCTCAGCGACTACAA 24284 Query 23790 CATACAAAAAGAGTCCAC 23807 ||| || || ||||| || Sbjct 24285 CATCCAGAAGGAGTCGAC 24302 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 338000982022736