Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Malassezia_20furfur_20[genbank_20GCA_5F001265065.1_202015-08-11] 2,092 sequences; 7,790,619 total letters Query= NC_030656.1 Length=133492 Score E Sequences producing significant alignments: (Bits) Value seq1557 107 2e-18 >seq1557 Length=2964 Score = 107 bits (118), Expect = 2e-18 Identities = 282/421 (67%), Gaps = 17/421 (4%) Strand=Plus/Plus Query 4281 TCGAAGAAATTAGTTTTGCCTTCTAACGAAATATTTTCCATAAAATCAAACGGATTAGTT 4340 ||||| || || | ||||| | | |||||| || |||||||| || || || || || Sbjct 221 TCGAAAAAGTTCGACTTGCCCTGCAGCGAAATGTTCTCCATAAAGTCGAAGGGGTTCGTC 280 Query 4341 GCGTTGTAATGTTTT---TCACACTTTAGAGCTACAAGCAATCGGTCAGCTACAAATTCT 4397 |||||||| || || | | | || || || |||| ||||| || ||||| || Sbjct 281 GCGTTGTAGTGCTTCGGGTTGCCC---AGCGCCACGAGCAGGCGGTCCGCCACAAACTCA 337 Query 4398 ATATACTGGCTCATGAGTT-CGCAGTTAATTCCAATTAATCTCACAGGTAGCGCGTATGT 4456 || ||||||| ||| || ||| ||| || ||||| | ||| || ||||||| | Sbjct 338 ATGTACTGGCACATCAGGCGCGC-GTTCATGCCAATCAGCGACACGGGCAGCGCGTCGGA 396 Query 4457 CAAAAACTCTTGTTCTATAGTTACGGCTTCTGTGATTATATCTTTTATTTTATCT---TT 4513 | || ||||| || || | || || || || || || || | | || | Sbjct 397 AAGGAAGTCTTGCTCGATCGCCACCGCCTCGGTAATGATGCGGTTCACCGTGTCGGGGTG 456 Query 4514 AGATGGTTTATTTACTAAGTATCCAAACAATAAACACGCAAAATCACAATGCAAACCTTC 4573 | | || || | || ||||||| | |||||||| || |||| ||| || Sbjct 457 CGCGCGCTTCTTGAG---GTGGCCAAACAGCAGGCACGCAAAGTCGGG-TGCAGACCCTC 512 Query 4574 GTCTCTGCTA-ATCAGTTCGTTAGAAAACGTTAATCCGGGCATTAAACCTCTCTTTTTAA 4632 ||| | || | || || ||||| || |||| | |||||||| | ||| | ||| || | Sbjct 513 GTCAC-GCGAGATGAGCTCGTTCGAGAACGACAGGCCGGGCATCAGACCGCGCTTCTTCA 571 Query 4633 GCCAAAATATAGCGGCAAATGACCCAGAAAAGAATATGCCTTCTACGGCGGCAAACGCTA 4692 |||| || || | |||||| || || || ||||| ||||| || |||||||||||||| | Sbjct 572 GCCAGAAGATCGAGGCAAACGAGCCCGAGAAGAAGATGCCCTCCACGGCGGCAAACGCCA 631 Query 4693 C 4693 | Sbjct 632 C 632 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 427038711836636