Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Malassezia_20furfur_20[genbank_20GCA_5F001265065.1_202015-08-11] 2,092 sequences; 7,790,619 total letters Query= NC_032001.1 Length=327147 Score E Sequences producing significant alignments: (Bits) Value seq1550 181 2e-40 seq1796 158 3e-33 seq1597 136 8e-27 seq1665 109 1e-18 seq1459 89.7 1e-12 >seq1550 Length=26160 Score = 181 bits (200), Expect = 2e-40 Identities = 177/228 (78%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 282872 ACCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGC 282931 ||||||||||||||| || || || || | ||| || || |||||||||||||| Sbjct 24333 ACCACCACGCAGGCGGAGCACAAGGTGCAGCGTCGACTCCTTCTGGATGTTGTAGTCGCT 24274 Query 282932 AAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGG 282991 ||||| ||||||||||| || || || ||||| ||||||| || |||||||| || Sbjct 24273 GAGCGTACGGCCATCCTCGAGCTGCTTGCCGGCGAAGATCAGGCGCTGTTGGTCCGGAGG 24214 Query 282992 AATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGAC 283051 ||| ||||||||||| |||||||| || || || | ||||| |||||||| | ||||| Sbjct 24213 AATGCCCTCCTTGTCCTGGATCTTGGCCTTCACATTCTCGATGGTGTCCGACGACTCGAC 24154 Query 283052 TTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCAT 283099 ||||| || |||||||||||||| | ||||| ||||| | ||||| Sbjct 24153 CTCGAGGGTAATCGTCTTACCCGTGAGGGTCTTGACGAACACTTGCAT 24106 >seq1796 Length=1778 Score = 158 bits (174), Expect = 3e-33 Identities = 144/182 (79%), Gaps = 0/182 (0%) Strand=Plus/Plus Query 282918 ATGTTGTAGTCAGCAAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGT 282977 ||||||||||| ||||| ||||||||||| || || || || |||||||| | || Sbjct 1 ATGTTGTAGTCGCTCAGCGTACGGCCATCCTCAAGCTGCTTGCCAGCAAAGATAAGGCGC 60 Query 282978 TGTTGGTCACCCGGAATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTG 283037 || ||||| ||||||||||||||||| |||||||| || || ||| | ||||| ||| Sbjct 61 TGCTGGTCCGGGGGAATACCCTCCTTGTCCTGGATCTTGGCCTTGACGTTCTCGATCGTG 120 Query 283038 TCCGAAGCTTCGACTTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGC 283097 ||||| | ||||| ||||| || |||||||| || |||| ||||||||||| | |||| Sbjct 121 TCCGAGGACTCGACCTCGAGCGTAATCGTCTTTCCTGTCAGGGTCTTAACGAAAACCTGC 180 Query 283098 AT 283099 || Sbjct 181 AT 182 >seq1597 Length=2736 Score = 136 bits (150), Expect = 8e-27 Identities = 159/215 (74%), Gaps = 0/215 (0%) Strand=Plus/Plus Query 282885 CGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGCAAGCGTGCGGCCA 282944 ||||| ||||| || | ||| || || |||||||||||||| ||||||||||| Sbjct 293 CGAAGCACCAGGTGGAGCGTCGACTCCTTCTGGATGTTGTAGTCGCTGAGCGTGCGGCCG 352 Query 282945 TCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGGAATACCCTCCTTG 283004 ||||| || || || || |||||||| | || || ||||| || |||||||||||| Sbjct 353 TCCTCGAGCTGCTTGCCCGCAAAGATGAGCCGCTGCTGGTCCGGGGGGATACCCTCCTTG 412 Query 283005 TCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGACTTCGAGAGTGATC 283064 || |||| ||| | || ||| ||||| ||||| | ||||| ||||| |||||| Sbjct 413 TCCTGGACCTTGGACTTGACGACGTCGATCGTGTCGCTCGACTCGACCTCGAGCGTGATC 472 Query 283065 GTCTTACCCGTCAAAGTCTTAACGAATATCTGCAT 283099 ||||| ||||| | ||||| | ||| || ||||| Sbjct 473 GTCTTGCCCGTGAGCGTCTTGATGAAGATTTGCAT 507 >seq1665 Length=2274 Score = 109 bits (120), Expect = 1e-18 Identities = 116/153 (76%), Gaps = 0/153 (0%) Strand=Plus/Minus Query 282872 ACCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGC 282931 ||| || |||||||| || || || || | ||| || || |||||||||||||| Sbjct 450 ACCGCCGCGCAGGCGCAGGACGAGGTGCAGCGTCGACTCCTTCTGGATGTTGTAGTCGCT 391 Query 282932 AAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGG 282991 |||||||| || ||||| || || || ||||||||||| | ||| || ||||| ||| Sbjct 390 CAGCGTGCGCCCGTCCTCGAGCTGCTTGCCGGCAAAGATGAGACGCTGCTGGTCCGGCGG 331 Query 282992 AATACCCTCCTTGTCTTGGATCTTTGCTTTTAC 283024 || |||||||| || |||||||| ||||| || Sbjct 330 GATGCCCTCCTTATCCTGGATCTTGGCTTTCAC 298 >seq1459 Length=3937 Score = 89.7 bits (98), Expect = 1e-12 Identities = 195/285 (68%), Gaps = 8/285 (3%) Strand=Plus/Plus Query 273780 GTGAAAATGTACCTGGCACTCGCATGGTCCTTGCCACCT-TGCAGCCTCGAACCAAACTG 273838 ||||| ||||| | || || || ||||||||| || || ||| || || ||||| Sbjct 1257 GTGAAGATGTAACGCGCGCTGGCGGCGTCCTTGCCGCCCATGGAGCG-CGTGCCGAACTG 1315 Query 273839 ACCCTCGGGCAGTAGCCAGTTTATGTTGTTGCTACCGACGTAATCCTGAGCCATATTCAC 273898 || | ||||| ||| ||| | ||||||||| ||| | | ||||| || | || Sbjct 1316 GCCGTTGGGCATGAGCATGTTGACGTTGTTGCTCCCGCAGAAGTCCTGCGCGAGGCCGAC 1375 Query 273899 GATAGTCCCCTGAAGGGATACCTCGCCGTGGTGATAGGCGCTGTGTTCGGCGATATAACC 273958 ||| ||| | ||| ||||||||||| |||||| |||| ||||||| || || Sbjct 1376 GATGGTCATCACGAGGCTCTGGTCGCCGTGGTGGTAGGCGGTGTGCTCGGCGACGTAGCC 1435 Query 273959 ACTG-AACTGAGCAACCTTCACATCGCTCGTCAAGTTTCGCTTGAA--TGCGGAATACAA 274015 ||| | ||| ||||| | ||| || | | ||| |||||||| || || ||| Sbjct 1436 -CTGCAGCTGCTGCACCTTGATCTCGGTCTTGAGGTTGCGCTTGAAGCAGCCGA--ACAG 1492 Query 274016 CACCTTCCGCTGCGAGGGCTTGAACCCATCAACGACCGATGGAAT 274060 |||||| |||||| |||||| | || || || ||||| || || Sbjct 1493 CACCTTGCGCTGCCCGGGCTTCAGGCCGTCGACCACCGACGGGAT 1537 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1046711143464168